Pairwise Alignments

Query, 370 a.a., Sensor kinase CckA from Azospirillum sp. SherDot2

Subject, 652 a.a., histidine kinase from Azospirillum brasilense Sp245

 Score =  223 bits (568), Expect = 1e-62
 Identities = 131/324 (40%), Positives = 184/324 (56%), Gaps = 21/324 (6%)

Query: 59  LTHSLLAFARRQMLTPKPAHMLPLIAGMRPLLERTLGGLIRFDIDVPPGTAPVMVDPAQL 118
           LT  LLAF+RRQ L P+   +  L+ G+R L+ER++G  IR +  + P   P+  D  Q+
Sbjct: 334 LTQRLLAFSRRQPLQPERTDLKTLVDGLRDLIERSVGEAIRVETRLAPELWPIWADANQV 393

Query: 119 ESAILNLAINARDAMPQGGVLTLRADNI---AIRRQGEPGCPAELAPGDYVAISLTDTGI 175
           E+A+LNLAINARDAMP GG LT++  NI   A     E G    + PGDY  + + DTG 
Sbjct: 394 EAALLNLAINARDAMPHGGQLTIQGVNIHLDATAAASETG----VLPGDYTLLEVADTGT 449

Query: 176 GMEEATLARAFEPFFTTKGVGGGSGPGLSMVYGMVAQSGGGVTIASKVGKGTSVTIFIPR 235
           GM    L RAFEPFFTTK +G G+G GLS +YG   QSGG V I S+VG GTSV +++PR
Sbjct: 450 GMPPDVLERAFEPFFTTKPLGQGTGLGLSQIYGFARQSGGYVRIDSEVGHGTSVKLYLPR 509

Query: 236 ASEARALTQEP------PSETIPGDGAVVLLVDDDLLVRAGAAAVLKMLGYQVIAATSGL 289
           +  A  L   P      P + +PG    VL+V+D+ +VR      L+  G  V+ A  G 
Sbjct: 510 SHHAENLGSVPVKVPDQPQQPVPG---TVLVVEDEPIVRMLLVEALREQGATVLEAEDGN 566

Query: 290 EALKVLQERMPVDVMITDYAMPGMSGVALIQETRRLAPSLPVLLITGYT-----DRPEGI 344
           EAL +L   + +D+++TD  +PG++G  + +  R L P L ++ +TGY      D+    
Sbjct: 567 EALTILNSPVGIDLLVTDVGLPGITGQRVAETARSLRPDLKIIFLTGYACNAVLDKELLA 626

Query: 345 ERCAVLHKPFKPQALAEQIATLLR 368
               +L KP        Q+  +LR
Sbjct: 627 PHTRLLSKPIAIDQFLAQVNAMLR 650