Pairwise Alignments

Query, 177 a.a., IS110 family transposase ISHne4 from Azospirillum sp. SherDot2

Subject, 326 a.a., IS110 family transposase IS621 from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score = 58.9 bits (141), Expect = 9e-14
 Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 10/178 (5%)

Query: 1   MRKREATRLQQTADAEASADIRSLLVVLDRRIAKIEERMTALVAAGPEMAVIDRRLRTIP 60
           M  +E  R +   + +  + I + L+ L+  + ++E+++  L    P+M    + L +IP
Sbjct: 144 MHTQELNRTETAREVQRPS-IDAHLLWLEAELKRLEKQIKDLTDDDPDMKHRRKLLESIP 202

Query: 61  GAGAVVAATLIAELPELGQLDR----RRIASLVGLAPVARDSGK--RSAPRAIAGGRPIV 114
           G G   +A L+A +   G  DR    R+ A+  GL P   +SG   R A R    G   +
Sbjct: 203 GIGEKTSAVLLAYI---GLKDRFAHARQFAAFAGLTPRRYESGSSVRGASRMSKAGHVSL 259

Query: 115 RTVLYIAALHASRWCQAFKEFRARFQTAGKPVKAALIATARKLLVTLNAMIATGTDYE 172
           R  LY+ A+ A+   +  + FR R    GK  K  L A  RKL      ++ +G  ++
Sbjct: 260 RRALYMPAMVATSKTEWGRAFRDRLAANGKKGKVILGAMMRKLAQVAYGVLKSGVPFD 317