Pairwise Alignments

Query, 355 a.a., Putative amino-acid ABC transporter-binding protein YhdW from Azospirillum sp. SherDot2

Subject, 272 a.a., Membrane-bound lytic murein transglycosylase F from Pseudomonas sp. RS175

 Score = 50.1 bits (118), Expect = 7e-11
 Identities = 42/124 (33%), Positives = 57/124 (45%), Gaps = 16/124 (12%)

Query: 4   KPVAATVGLLLALQPLLSAGTVAAQPDAAARNGDRPVLAEIERRGVVRCGVSFN-PGFAA 62
           K  A  V L + L PLL +    AQ D          L +I   G +RC V+ + P   +
Sbjct: 2   KNPALAVALSVVLTPLLVS---PAQADK---------LDDIIGSGKLRCAVTLDFPPMGS 49

Query: 63  NDDGGRPVGFMVDLCRALAATVLGKADAIEIRRLSKPQEFAAVAAGEVDVSFAQTSWTLT 122
            D+  +PVGF VD C  LA  +  +A+ +E      P    A+ +G  DV  A TS TL 
Sbjct: 50  RDESNKPVGFDVDYCHDLAKVLGVEAEVVE---TPFPDRIPALISGRADVIVASTSDTLE 106

Query: 123 RDAT 126
           R  T
Sbjct: 107 RAKT 110