Pairwise Alignments

Query, 725 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 662 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  295 bits (754), Expect = 6e-84
 Identities = 205/575 (35%), Positives = 316/575 (54%), Gaps = 34/575 (5%)

Query: 174 QKFAAPWTSVLNNDEEQARSTLAEP-----DAAPAAMREAAATLNKVMAQKKPLAIVTAE 228
           Q  +A    V    +++A   +AE      DA   A+      ++ +     P A    E
Sbjct: 91  QAISAFGALVAGTPQQEAAERIAEAYRKHEDALKPAIGLVGQRVDLISTSLLPAAEGLVE 150

Query: 229 -AANIRNMLMEASTTRDDQRLA-IIETRVGVSLAG---LSNNAE----ALPERLAAVATK 279
            A ++R+   EA      Q  + +IE  +   +A    LS+ +E    A+ E L AV   
Sbjct: 151 WAVDVRDKAFEAGDAPTAQHASKVIENMLRARVAADGYLSDGSEEQFNAIWEALFAVT-- 208

Query: 280 QAELLNGFSIGENSMVTLRQKEL---TIEGYFTQLLESNHALTTTLAKGISALVDGQKSS 336
             E L+G            Q E    T+ G   ++     AL     +   A +  +  +
Sbjct: 209 --ENLDGIPTAAQVQDLYGQYEEALNTLSGILGEITTMETAL-----RDAGAAITREGEN 261

Query: 337 IAEASAATTHMLDNSRMMQIAVAGISILVSILVVWL-------YIGRIVIRRMMDLKTGM 389
           + +A+ A   ++ ++   Q+  A   ++ S LV+ L       +IGR + + +  +   +
Sbjct: 262 VKDAALARQQIIRDATRSQLGNASSLVVWSNLVILLLGLALAGFIGRGISKPLGAMTAAL 321

Query: 390 GRIAAGDLDAEIALTGK-DEIAEMGAALLVFRDTAREVETARTAAEAERQRAAGERRQTM 448
            +++ GD +  I   G+ DE+  M  A  VF++   ++E  R      +++A  +R   +
Sbjct: 322 KKLSEGDSETTIPGLGRGDELGAMAHAAQVFKEYNHKMEALRRDQVEAQKQAEADRHSAI 381

Query: 449 LSLADQFENGVKTVVETVSAAATQMHQTAAGMVATADDTSRQAGNAAEAAETASVNVDGA 508
             LAD  EN V  V+  + A+A QM  +A  M  TA+DT+R+AG+ +   ++A+ +V+  
Sbjct: 382 RKLADDLENTVSGVIGVIGASAGQMEASARSMSVTAEDTARRAGDVSTITDSATHDVEEV 441

Query: 509 ASAAHELSQSISEIARQVTESATIAAKAANEAERTDSTMRDLNEAASRIGAVLDLISDIA 568
           A++A EL+ SISEI+RQV  S+TI+  A   A +    + DL +AA RIG V+ LI+DIA
Sbjct: 442 AASAEELNASISEISRQVHHSSTISRDAVERASKASHRVSDLKDAAERIGEVVALITDIA 501

Query: 569 GQTNLLALNATIEAARAGEAGKGFAVVASEVKQLASQTAKATEQIAGQIGAMQQATGEAV 628
            QTNLLALNATIEAARAG+AGKGFAVVA+EVK LA+QT++AT++I  QIGA+Q AT EAV
Sbjct: 502 DQTNLLALNATIEAARAGDAGKGFAVVANEVKSLANQTSRATDEIGKQIGAVQLATNEAV 561

Query: 629 GAIRSIGLTIGRLNDIAASIAAAVEEQGAATSEIARNVQQAAGGTAQASQNIGQVRTAAG 688
            AI  I   IG ++ ++A++AAA+EEQ AAT  IA++ Q+AA GT QAS  +G V  AA 
Sbjct: 562 AAISGIVTVIGEMDQVSAAVAAAIEEQDAATRTIAQSTQRAASGTQQASSTMGNVTQAAA 621

Query: 689 QTGQSAQEVLSVAQEVSSQTGRLQQQIDRFLSQVR 723
            TG +A EVL+ A E++ Q   L+ Q+ RFL+ +R
Sbjct: 622 NTGTAATEVLAAAGELTRQASELRTQVARFLAHIR 656



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 34/165 (20%), Positives = 64/165 (38%), Gaps = 14/165 (8%)

Query: 61  VGQAVPAMTEGMAVAQQAERLVALAPALTSADSAAAREAVSARIAAAKEEFNARLSRLRA 120
           +G+ V  +T+   +A Q   L   A    + ++A A +A       A E  +      RA
Sbjct: 490 IGEVVALITD---IADQTNLLALNA----TIEAARAGDAGKGFAVVANEVKSLANQTSRA 542

Query: 121 TGSAGSQLAAIEEAS-------QGLLGNLAQLDQAAAERVALGAERMAMMPKVMAAEAEI 173
           T   G Q+ A++ A+        G++  + ++DQ +A   A   E+ A    +  +    
Sbjct: 543 TDEIGKQIGAVQLATNEAVAAISGIVTVIGEMDQVSAAVAAAIEEQDAATRTIAQSTQRA 602

Query: 174 QKFAAPWTSVLNNDEEQARSTLAEPDAAPAAMREAAATLNKVMAQ 218
                  +S + N  + A +T        AA  E     +++  Q
Sbjct: 603 ASGTQQASSTMGNVTQAAANTGTAATEVLAAAGELTRQASELRTQ 647