Pairwise Alignments

Query, 602 a.a., Putative multidrug export ATP-binding/permease protein from Azospirillum sp. SherDot2

Subject, 610 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas fluorescens FW300-N2E2

 Score =  293 bits (750), Expect = 1e-83
 Identities = 202/575 (35%), Positives = 304/575 (52%), Gaps = 27/575 (4%)

Query: 30  LAVGIAGAIALSTLADVFMPLFAGRLVDALTMLPGDRDAALHAALTAFGAMVALGVGMVV 89
           L VG+ GA     L +V +  +  R++D     P      +H    A+ A+VAL     V
Sbjct: 44  LVVGLIGA-----LIEVALFSYLSRIIDLTQGTPNVDFFKVHGLELAWMAVVAL-----V 93

Query: 90  MRHIAWSSVIPFTLRIMADVGQDSFHRIQRFS------TDWHANSFAGSVVRKITRGMWA 143
            R I + ++    +      G  S  R Q  S       ++  N FAG + ++I +   +
Sbjct: 94  FRPI-FVALHDLLVHQTLSPGMTSLIRWQNHSYVLKQSLNFFQNDFAGRIAQRIMQTGNS 152

Query: 144 LDTLDDTLLLALWPSLVVLIGTMVTLG-LHWPAMGLVIALGTAIYIAMTVLFSTLYIAPA 202
           L       + ALW  L+  I ++V      W  M + + +  A YI     F    +   
Sbjct: 153 LRDSAVQAVDALWHVLIYAISSLVLFAEADWRLM-IPLLMWIAAYIGALCYFVPR-VKER 210

Query: 203 ARLSNAWDTKLGGTLADAIGCNAVVKAFGAEPREDDRLSTVVGKWSRRTHRTWTRHTRHS 262
           + +S+   +KL G + D       +K F     E       + + + +        T   
Sbjct: 211 SVVSSDARSKLMGRIVDGYTNITTLKLFAHTNFEQQYAREAIQEQTEKAQLAGRVVTSMD 270

Query: 263 TVQLVLLLLIRSAVVATALWLWWRGQATPGDVAYVLTTYFVVHGYLRDIGMHINHLQRSV 322
            V   +  L+       ALWLW +   + G +A        +      I   +N +  ++
Sbjct: 271 VVITSMNGLLIVGTTGLALWLWTQSLISVGAIALATGLVIRIVNMSGWIMWVVNGIFENI 330

Query: 323 NEMEELVAIHAEPLGVEDRPDAIPIRIGAGEVRFDLVTFQYGGHTTPLYRDLSLTIEAGE 382
             +++ +   A+P+ V DR  A P+ +  GEVRF+ V F YG   + +  DL+L I+ GE
Sbjct: 331 GMVQDGLQTIAQPVSVTDRDQAKPLAVARGEVRFEHVDFHYG-KKSGVIGDLNLIIKPGE 389

Query: 383 RVGLVGPSGSGKTTFVKLIQRLYDVTGGRVLIDGQEVAGATQHSLRSQIAIVPQEPILFH 442
           ++GL+GPSG+GK+T V L+ RLYDV GGR+LIDGQ++A   Q SLR +I ++ Q+  L H
Sbjct: 390 KIGLIGPSGAGKSTLVNLLLRLYDVQGGRILIDGQDIAEVGQESLRERIGMITQDTSLLH 449

Query: 443 RTLAENIAYGRPGASMAEIERAAKLANAHDFIVRLPK-----GYATLVGERGVKLSGGER 497
           R++ +N+ YG+P A+ A++  A + A A +FI  L       G+   VGERGVKLSGG+R
Sbjct: 450 RSIRDNLLYGKPDATDAQLWEAVRKARADEFIPLLSDAEGRTGFDAHVGERGVKLSGGQR 509

Query: 498 QRVALARAFLADAPILILDEATSSLDSESEALIQEAIERLMQGRTAIIIAHRLSTVRTLD 557
           QR+A+AR  L DAPILI+DEATS+LDSE EA IQE++E LMQG+T I IAHRLST+  +D
Sbjct: 510 QRIAIARVLLKDAPILIMDEATSALDSEVEAAIQESLETLMQGKTVIAIAHRLSTIARMD 569

Query: 558 RILVFKQGRVVEEGSHAVLLHRPGGLYRRLFEQQS 592
           R++V + GR+ E GSHA LL   GGLY RL++ Q+
Sbjct: 570 RLVVLENGRIAETGSHAELLAH-GGLYARLWQHQT 603