Pairwise Alignments

Query, 408 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 698 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  155 bits (393), Expect = 3e-42
 Identities = 93/285 (32%), Positives = 154/285 (54%), Gaps = 1/285 (0%)

Query: 120 AETRRVALMRDLSERVEREVGGFATELADAGRRLESAVAAVRSAGTDGLRQAADAAGAAR 179
           AE  R A MR L+   E  VG     +  A  +L+ +   + S   +   QA   A A++
Sbjct: 275 AEAERKAAMRQLANTFEGSVGKVIQTVTSAATQLQVSSTQMASTAAETSAQATTVASASQ 334

Query: 180 AVDGSVSAIAGMLDRLASTSDQISGDTSKAREISLAAASDSDRATTVMNSLRSAAEQIAS 239
               +V  +A   + L+S+  +I+    +++ ++  A  ++      + +L   A +I  
Sbjct: 335 QASANVETVAAATEELSSSITEIAKQVERSQSVASRAQDEAANTNVQIRALSENANKIGE 394

Query: 240 VVKLINAIASQTNLLALNATIEAARAGEAGRGFAVVANEVKALSRQTADATKQIADQVAN 299
           +V LIN IASQTNLLALNATIEAARAG+AG+GFAVVANEVK L+ QT  AT++IA Q+  
Sbjct: 395 IVNLINDIASQTNLLALNATIEAARAGDAGKGFAVVANEVKHLATQTGKATEEIASQIRA 454

Query: 300 LQKETAAVDEALGRIHSTIGSIQAINGTVAAAIDEQATLTSDVARSLDRSRQDAMAAEQR 359
           +Q  T     A+  I   I  +  I+ +VA+A++EQA  T ++AR+++++          
Sbjct: 455 VQDGTNNAVHAIDGITKVISEMGEISASVASAVEEQAAATQEIARNVEQAAAGTAEVSSS 514

Query: 360 IGDAEQTLGGVTRNLEELTALSRSIAERAGSLGSGLAGRVTDVLR 404
           +   EQ         E++ + +  +++++  L + + GR  D +R
Sbjct: 515 VVTVEQAARDTGAAAEQIHSAATDLSQQSEFLRAEV-GRFLDQVR 558



 Score = 26.2 bits (56), Expect = 0.003
 Identities = 45/215 (20%), Positives = 73/215 (33%), Gaps = 33/215 (15%)

Query: 206 TSKAREISLAAASDSDRATTVMN-----SLRSAAEQIASVVKLINAIASQ---------- 250
           + K + I L  A+D D+AT++ N           EQI + ++L   IA +          
Sbjct: 125 SEKNKVIELLKANDPDKATSLANGPALQKFMHLDEQIVANIELQERIAKEEYEEGKASAS 184

Query: 251 ------TNLLALNATIEAARAGEAGRGFAVVANEVKALSRQTADATKQIADQVANLQKET 304
                   L  L   + AA A    R      N +K    Q             NL  E 
Sbjct: 185 QKINFSLTLGGLALALGAAIAFVIARSITGPVNGIKGCMEQLT---------AGNLSAEV 235

Query: 305 AAVD--EALGRIHSTIGSI-QAINGTVAAAIDEQATLTSDVARSLDRSRQDAMAAEQRIG 361
             VD  + LG++   +G   + +        +++A      A      RQ A   E  +G
Sbjct: 236 PGVDRGDELGQMAKAVGVFKEGLLRVKEMEAEQEAQKARAEAERKAAMRQLANTFEGSVG 295

Query: 362 DAEQTLGGVTRNLEELTALSRSIAERAGSLGSGLA 396
              QT+      L+  +    S A    +  + +A
Sbjct: 296 KVIQTVTSAATQLQVSSTQMASTAAETSAQATTVA 330