Pairwise Alignments
Query, 930 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2
Subject, 1209 a.a., response regulator from Synechocystis sp000284455 PCC 6803
Score = 210 bits (534), Expect = 5e-58
Identities = 191/676 (28%), Positives = 312/676 (46%), Gaps = 80/676 (11%)
Query: 261 GLVVLAGIDREEAMAVWRTRTLHTVVETLVGLLAVLGMLAWGMRYLDRERKAQVALAEAR 320
GL++L DR + W T VE + + +G+ + L++ER+ + L E
Sbjct: 439 GLLILHQCDRSRS---WNTEE----VELVKAVADQVGIALAQAKLLEQEREIRQQLIEQN 491
Query: 321 NAVERTSAERDESARLATALNHARDMAESARQAAEAANRAKGEFLAGLSHELRTPLNAVI 380
A+ +A +AAE ANRAK +FLA +SHE+RTP+NAVI
Sbjct: 492 KALM------------------------TATKAAEDANRAKSDFLATMSHEIRTPMNAVI 527
Query: 381 GFADLIAREAEGPVGTPSYRQYAANVRDSGQHVLELINEILDHARAEAGALTIEEGHCDL 440
G L+ + + T +Q+ +R SG+ +L LIN+ILD ++ E+G +E ++
Sbjct: 528 GMTGLL---LDTHLNT-QQQQFTETIRSSGEALLSLINDILDFSKIESGQFKLEIHPFEI 583
Query: 441 EAAADFAVRMLTPRAERAGVLLSAVVAPAVG-ALRGDDRRIRQILLNLIANGVKYTPSGG 499
+ + + ++ P+A + L + P V A+ GD R+RQ+L+N++AN VK+T SG
Sbjct: 584 QQCVEECLDLVAPQAFAKKLDLVYQIEPQVPMAILGDLTRVRQVLVNILANAVKFTTSGS 643
Query: 500 -SVTLSALLEDG-----TPVIRITDTGLGIPAEDLDRVLEPFARVESADHRGVEGAGLGL 553
V +SA + + T I DTG+GI + + + F++V ++ R G GLGL
Sbjct: 644 IQVRVSATVANQQQNKYTIQFSIKDTGIGISPDQQSALFKSFSQVNTSIARKYGGTGLGL 703
Query: 554 PLTKRLVELHGGTLALRSTLGVGTTVTVRLPANRLLPAEALGMPATPPARPAPATNSAAS 613
+ KRL E+ GG + + S E G P A+ + N S
Sbjct: 704 AICKRLTEMMGGQIWVESY------------------GEIAGNPPVDWAKTS-KNNPLES 744
Query: 614 SAAS---PSIAPSLTVPAQPLAQPLAPALSPPPSGPLSILLVDDDPTVRDMVAGLLRGWG 670
+ A+ A S T+ +P L+ LS +L+VDD+ + + L+ WG
Sbjct: 745 TGATFYFTITAQSTTIVRRP--NDLSCQLS---LAGKRLLIVDDNQLSCEGLKQLVTAWG 799
Query: 671 HRVIAATNANEALVVLDGPEKLDLLLSDVVMPPGMDGTELARHTARMRPG--LPVLLASG 728
+ A T+ EA L E DL + D+ M +DG +LA + G LP+++ +
Sbjct: 800 LQAQATTSGWEAFSWLRQGECFDLAIIDLQMEE-VDGLQLAEALRTLPTGESLPLVILTP 858
Query: 729 FAAHAVGTPAGFGPNV-AMIAKPFSIEDLRRQLARIAGRRVGAAPQAQAMAAQAIAAPPP 787
A ++ A ++ P + L + + +
Sbjct: 859 SPTSLAELSARTDISIAACLSSPIKKSLVYEVLCEVF--KADETDNSLFNGDWRSGITEA 916
Query: 788 AQPPAPPTPRPA-----GPPRLLIAEDLSINRELLAALFKDSGYRIDLVADGAAAVEAVK 842
+ P R A P R+L+ ED +IN+ + + + GYR D+ +G A++ +
Sbjct: 917 VKRTCSPQEREARIKTLSPLRILLVEDNNINQRVALLMLEKLGYRPDIAGNGLEALQVLH 976
Query: 843 AGDYDLVLMDVQMPEMDGLEASRIIRAMPPPRGDLPILALTAGSSDEERRDCRDAGMNGH 902
YD++LMDV+MPEMDGL A++ IR P I+A+TA + +R C AGMN +
Sbjct: 977 QASYDVILMDVEMPEMDGLSATKAIRQDFPADEQPWIIAVTAYAMQGDRETCLAAGMNDY 1036
Query: 903 IGKPYERDLLLRQIAR 918
I KP + LL + R
Sbjct: 1037 ITKPIRENDLLDALQR 1052
Score = 46.6 bits (109), Expect = 1e-08
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 803 RLLIAEDLSINRELLAALFKDSGYRIDLVADGAAAVEAVKAGD-YDLVLMDVQMPEMDGL 861
RLLI +D ++ E L L G + G A ++ G+ +DL ++D+QM E+DGL
Sbjct: 777 RLLIVDDNQLSCEGLKQLVTAWGLQAQATTSGWEAFSWLRQGECFDLAIIDLQMEEVDGL 836
Query: 862 EASRIIRAMPPPRGDLPILALTAGSSDEERRDCR-DAGMNGHIGKPYERDLLLRQIARTL 920
+ + +R +P LP++ LT + R D + + P ++ L+ +
Sbjct: 837 QLAEALRTLPTGE-SLPLVILTPSPTSLAELSARTDISIAACLSSPIKKSLVYEVLCEVF 895
Query: 921 AA 922
A
Sbjct: 896 KA 897
Score = 35.0 bits (79), Expect = 3e-05
Identities = 57/205 (27%), Positives = 80/205 (39%), Gaps = 20/205 (9%)
Query: 646 PLSILLVDDDPTVRDMVAGLLRGWGHRVIAATNANEALVVLDGPEKLDLLLSDVVMPPGM 705
PL ILLV+D+ + + +L G+R A N EAL VL D++L DV MP M
Sbjct: 935 PLRILLVEDNNINQRVALLMLEKLGYRPDIAGNGLEALQVLH-QASYDVILMDVEMPE-M 992
Query: 706 DGTELARHTARMRPGLPVLLASGFAAHAV----GTPAGFGPNVAMIAKPFSIEDLRRQLA 761
DG + + P A+A+ T G N I KP DL L
Sbjct: 993 DGLSATKAIRQDFPADEQPWIIAVTAYAMQGDRETCLAAGMN-DYITKPIRENDLLDALQ 1051
Query: 762 RIAGRRVGAAPQAQAMAAQAIAAPPPAQPPAPPTPRPAGPPRLLIAEDLSINRELLAALF 821
RI ++ + P P P P +L A+ L N L ++
Sbjct: 1052 RI----------DFSVLSLTKNKPAPLSEPVVNVGLVNPVPEVLKADQLEENLVLDLSIL 1101
Query: 822 KDSGYRIDLVADGAAAVEAVKAGDY 846
+G R DGA ++ + GDY
Sbjct: 1102 --TGIREMAGPDGATFLQVI-IGDY 1123