Pairwise Alignments

Query, 412 a.a., Multidrug resistance protein MdtA from Azospirillum sp. SherDot2

Subject, 367 a.a., Probable Co/Zn/Cd efflux system membrane fusion protein from Pseudomonas fluorescens FW300-N1B4

 Score =  226 bits (576), Expect = 9e-64
 Identities = 133/322 (41%), Positives = 191/322 (59%), Gaps = 6/322 (1%)

Query: 74  ANNKPPPTPVALAEATVQTIPKYLSAIGTLQAARQVTVAPEVAGRVDRIPFESGARVKAG 133
           A  + P T V LA+   Q    YL AIG L+A RQV V+ EV+G+V  I FESG +V AG
Sbjct: 35  AEQRIPSTKVGLAQVKKQPYTYYLEAIGKLEAQRQVLVSAEVSGKVVDIDFESGDQVAAG 94

Query: 134 DPLVQLNDATEQADLLAQRAQARLAELNLERYRDLRRSQATPQSNVDQYQAQLDEINANM 193
             L+ LNDA EQ +L+  + +   A+    R ++L ++ A  +   D  +AQ D    +M
Sbjct: 95  QVLLTLNDAPEQGELVRLKGEFESAKAQFARVQELAKTGAESRRAFDSARAQYDAAKGDM 154

Query: 194 KRTSALIGQKLIKAPFDGELGIRQVNVGDYVNPGATIVTLTDLSQLYINFTLPEQSFTKL 253
           +R  A I Q+ I+APF G LGIRQ ++G Y+  G  + TLTD   L +NFTL E+  +++
Sbjct: 155 ERMQAQIAQRHIRAPFAGTLGIRQAHLGQYLEAGGAVATLTDPGVLRVNFTLAERDGSRV 214

Query: 254 SVGQSVLINVDALPGRDFEAKITTIEPQVSADTRAVKVQATMDNRERQLRPGMFANVRVV 313
            +GQ+V   VDA     F+ KI  ++PQ++  +  + VQA + + ++ LRPGM+A V V 
Sbjct: 215 QLGQTVQAKVDAWADVKFQGKIVAVDPQIN-QSHTINVQAVITDTKKLLRPGMYARVSVT 273

Query: 314 LPPQPNTLTVPETAVDYTVYGDSVFVATQQKTQDGKEQLVVERKPVKVGDRLANRVEIRS 373
           L PQ + L +PETA+ Y  YG+SVF      T D   Q  V+R+ +KVG+R      +  
Sbjct: 274 L-PQTSELVIPETAITYNAYGESVF---SVYTDDLGVQ-KVKRESIKVGERRDGWAVVDK 328

Query: 374 GVNAGDRVVVSGQLKLANGAAV 395
           G+N G +VV SGQLKL +G AV
Sbjct: 329 GLNEGVQVVTSGQLKLHDGVAV 350