Pairwise Alignments

Query, 412 a.a., Multidrug resistance protein MdtA from Azospirillum sp. SherDot2

Subject, 371 a.a., periplasmic multidrug efflux lipoprotein precursor from Caulobacter crescentus NA1000

 Score =  151 bits (382), Expect = 3e-41
 Identities = 103/357 (28%), Positives = 170/357 (47%), Gaps = 15/357 (4%)

Query: 40  LTVRIVITLIVLGLLGAGLYGFNTFRAKAIADFFANNKPPPTPVALAEATVQTIPKYLSA 99
           L V +   +++LG+ G  L     F  K I           T   +AE   +     +  
Sbjct: 8   LVVALAAVVLMLGVGGFKL----AFAKKEITGGGGGRATSVTQTVVAE---RPFTDRIEV 60

Query: 100 IGTLQAARQVTVAPEVAGRVDRIPFESGARVKAGDPLVQLNDATEQADLLAQRAQARLAE 159
           +G  +  + VT+    A  +  + F  G  V  G  LV+L    E A +   RA+   AE
Sbjct: 61  LGAAKGLQSVTITSNTAELITAVRFTDGQAVSRGQVLVELKAEAEDAGIAEARARLAQAE 120

Query: 160 LNLERYRDLRRSQATPQSNVDQYQAQLDEINANMKRTSALIGQKLIKAPFDGELGIRQVN 219
            + +R++ L      P++  +Q  A  +   A +    A    ++I+APF G +GI  V 
Sbjct: 121 RDYKRWKTLADQGIAPRATAEQSLAAYETAKAVVDSARANKLDRVIRAPFAGRVGISDVA 180

Query: 220 VGDYVNPGATIVTLTDLSQLYINFTLPEQSFTKLSVGQSVLINVDALPGRDFEAKITTIE 279
            G  ++PG  IVTL D S + ++F++P++    L +G  +    DALPG  F  +I  ++
Sbjct: 181 PGMLISPGTAIVTLDDTSVIRVDFSVPDRYLETLRIGLPINAQPDALPGETFRGRIAQLD 240

Query: 280 PQVSADTRAVKVQATMDNRERQLRPGMFANVRVVLPPQPNT-LTVPETAVDYTVYGDSVF 338
            ++   TRA+K +A   N   +L+PGM   V+V +     T + VPE AV +     SV+
Sbjct: 241 TRIDTTTRAIKARAEFPNANGRLKPGML--VKVAIDKGVRTGVAVPEAAVQFEGEQASVY 298

Query: 339 VATQQKTQDGKEQLVVERKPVKVGDRLANRVEIRSGVNAGDRVVVSGQLKLANGAAV 395
           V T+     G + ++  R  V  G    + VEIRSG+  GD++V  G  ++ +GAA+
Sbjct: 299 VITK-----GPKGMIARRTDVTTGITQDSFVEIRSGLKKGDKIVADGLNRIQDGAAI 350