Pairwise Alignments

Query, 306 a.a., HTH-type transcriptional regulator SyrM 1 from Azospirillum sp. SherDot2

Subject, 298 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  127 bits (319), Expect = 3e-34
 Identities = 91/301 (30%), Positives = 143/301 (47%), Gaps = 11/301 (3%)

Query: 1   MQAIDLNLLLPLDALLTERSVTGAARRLGLSSSAMSRTLARLRRVTGDPLLVQAGRSLVP 60
           +Q +DLNL +  DA+ TER++T AA RL ++  A+S  L+RLR    DPL ++  ++++P
Sbjct: 3   LQNVDLNLFVVFDAIYTERNLTRAAERLCITQPAVSNALSRLRTSLNDPLFIRTPKAMMP 62

Query: 61  TPYAEEISGHVHALCRDVQAALRPAGGRLDLASVRRTFTIRAGEGFVELMAAPVMVAVAD 120
           TP AE + G V    + + +++   G   D       F +   +   E M   ++ A+  
Sbjct: 63  TPVAENMIGQVREALKLLSSSMH-LGDSFDPLLAEHHFQLGMFDVTEETMLPSLLAALQV 121

Query: 121 AAPHVRLRFVPKPDKE-AEPLRDGRIDLEIGVLGTSAPELLTQLLFRDRLVGVARSGHPL 179
            AP + +   P   +E  +    GR+DL I     + P+L    L     V + R  HP 
Sbjct: 122 HAPRLSISSYPVSREEMLKEFVSGRLDLAIDAPIVTHPDLYHHPLVTVPYVCLVRKDHPE 181

Query: 180 LADGAVTLERYAACGHVAASRRGEFHGPVDDALAELGLIRTVPLVVPRYPDAMRVAAGSD 239
           + D  ++LE+Y A  HV  S R +  G VD AL  LG  R + +    +  A ++ A ++
Sbjct: 182 VGD-TLSLEQYLALSHVHVSSRRQGVGYVDAALNRLGKHRNIQVRTKHHQAAPKLVAETN 240

Query: 240 LIAAVPRSCLGNSLTAGDAGWGLQSFELPVRTADFAISAIWHPRLQADPAHRWLRETIAA 299
           L   VP S   N+         L+  +LP           WH     D A+RWLRE I A
Sbjct: 241 LATTVPESLAKNT--------DLKVLKLPFEVEPIEWHLYWHRSADQDNANRWLREFITA 292

Query: 300 V 300
           +
Sbjct: 293 L 293