Pairwise Alignments

Query, 324 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 355 a.a., branched-chain amino acid ABC transporter permease from Variovorax sp. OAS795

 Score =  163 bits (412), Expect = 7e-45
 Identities = 119/336 (35%), Positives = 177/336 (52%), Gaps = 40/336 (11%)

Query: 22  AVIAAILLLIAVAAPFVLYPVFLM----KVLCFALFACAFNLLIGFAGLLSFGHAAFFG- 76
           A++  +L +    APF+   V  +    K+L F +   +F+LL+G+ G++SF H  FFG 
Sbjct: 18  ALLLVVLFIALAFAPFIFPGVKALSVAAKILVFVVLVASFDLLLGYTGIVSFAHTMFFGI 77

Query: 77  ---GAAYIAAHVVKEWGWAPEFGLIAATAVAGLMGLVFGLIAIRRQGIYFAMITLALSQM 133
              G A  A  +   WG A   GL AA AV+ ++    GL ++R + I+FAMITLA++  
Sbjct: 78  GAYGIAISATRLGPGWG-AVLLGLGAALAVSLVLSFAIGLFSLRVRAIFFAMITLAVASA 136

Query: 134 VFFLALQLP-FTHGEDGIQGVPRGTLFGLFDLGQP----------LTMYYTVLAIFVAGF 182
              LA QL  FT GEDG+       +   F+  +           L  YY +    V   
Sbjct: 137 FQTLASQLSDFTGGEDGLTFKLPELISPSFEFAEEPFLGVSLDGRLLCYYMLFVTAVVLV 196

Query: 183 ALIWRTVHSPFGQVLKAIRENEPRAVSLGYRTDRYKLVAFVLSASLAGLAGGTKALVFQL 242
             + R V+SPFG+VL+AIRENE RA ++GYR   Y+  A VLSA  A LAG   A+  + 
Sbjct: 197 LALLRIVNSPFGRVLQAIRENEFRAEAIGYRVVVYRTTAAVLSALFATLAGAMLAIWLRY 256

Query: 243 -ASLTDVTWQMSGEVVLMTLLGGMGTLFGPVVGAGLVVTLESYL---------ASTSLPV 292
               T +++++  +V+L+ ++GGMGT++G  +GA L V  +SYL         A++ LP 
Sbjct: 257 NGPDTSLSFEIMIDVLLIVVIGGMGTIYGAAIGAVLFVLAQSYLQDLLRVGSEAASGLPW 316

Query: 293 PVV----------IGCIFVVCVLVFRRGIVGELLAR 318
                        +G +FV+ V  F  GIVG+L AR
Sbjct: 317 LAALLSPDRWLLWLGVLFVLSVYYFPTGIVGKLRAR 352