Pairwise Alignments
Query, 1246 a.a., Photosystem I assembly protein Ycf3 from Azospirillum sp. SherDot2
Subject, 602 a.a., hypothetical protein from Burkholderia phytofirmans PsJN
Score = 235 bits (599), Expect = 1e-65
Identities = 206/584 (35%), Positives = 255/584 (43%), Gaps = 59/584 (10%)
Query: 10 SARLAALLREALAHHRAGDLDGAERTYRAMLAADGRNADALHLLGVLHHQRGQDADAVRL 69
+A LA+L+ AL H+AG LD AE YR L D + ALH GVL QRG A L
Sbjct: 17 AAYLASLIDAALEAHQAGRLDAAESLYRETLVLDPAHTGALHYFGVLQFQRGDHDTAASL 76
Query: 70 IGQAVARRPGVADQHANLGLALHALGRLAEAEAEYRRALALRDAYAEAHNSLGSALQDQD 129
+ +A+ A +N GL ALG L EA Y +AL L+ +A+AHN+ G ALQ Q
Sbjct: 77 MSRALKLDRHDAACWSNRGLVAAALGHLDEAMICYDQALQLQPDFADAHNNFGVALQAQG 136
Query: 130 RLAEAGVHYRRALDLNARYAEAWANLGTLLRAQDDYAEAETALRHALRLDPGHATALTNL 189
L+EA YR AL N +A NLGT L + +A R AL LDP A A N+
Sbjct: 137 DLSEAIEQYRLALASNPMLLDARLNLGTALSKLGHFDDALACYREALSLDPTSAEAHFNV 196
Query: 190 GVVLKETGRPAEAEAAHLGALRLAPGDAETMVNLALL----------------------- 226
G K G A A+ AL L E +NL L
Sbjct: 197 GNAHKARGDHGAAIASFERALSLRANYTEAHINLGSLIGKLGDYAGAEAHYRRAVALKPN 256
Query: 227 ----------REAQGRGDEAEALYAQALIHAPGFALARWNLALRLLGRGRLADGWEEYEA 276
AQGR DE E Y QAL P +A A NLA LL RG GW E+
Sbjct: 257 PTHLVCLGGSLGAQGRLDEEEGFYRQALALDPHYADAHQNLAWLLLKRGDYRQGWAEFAL 316
Query: 277 RFASRRVSAGRSFSLPAFSEWTWDGAPGRRLLVWREQGLGDELMFGTALPDLAERFGPEM 336
R+ R S + ++P +EW + GRRLL+ EQG GD F LA+R
Sbjct: 317 RW---RKSDYDAIAVPGVAEWRGESLEGRRLLLVGEQGFGDHFQFLRFAGVLAQRGATVE 373
Query: 337 LVVEVDARLTGLVGRALPGATVRAQTADPAPAPAPAPAPAPADADAHLPMGSLPQLL-RS 395
L V L LV R RA + P D +PM S+P +
Sbjct: 374 LCVR--EPLLPLVERI--AGVHRAFSGKP-----------DGQYDFWVPMMSVPSCIGLD 418
Query: 396 GLADFPARPSWLAPDPLRLAEWRDRLAALGPGLR-VGLCWGSQNMLGERKASYTTLAGWA 454
LAD PA +L D ++ WR RL A R VGL W G + LA
Sbjct: 419 RLADIPAEVPYLFADKTKIKAWRKRLGATDKSKRKVGLVWAGSPGFGNDRYRSMQLAELD 478
Query: 455 PLLTLPGLIPVTLQYDGREAEIAAVEAQLGLRIRRWPGTDLKNDLEGVAALIAGLDLVVT 514
L + + LQ A++A EA R + T N E AALI LDLV+
Sbjct: 479 ALSDIEDIAWYALQKGPAHAQLA--EAPPAFRAHDF--TAELNSFEDTAALIMNLDLVIA 534
Query: 515 VASSVGEMAGALGVPVWRFGPA-GDWTAL-GTGVRPWFPSMRLW 556
V + V +AGALG PVW PA DW L PW+P MRL+
Sbjct: 535 VDTGVAHLAGALGKPVWLMLPANSDWRWLEARSDSPWYPGMRLF 578
Score = 151 bits (382), Expect = 1e-40
Identities = 176/570 (30%), Positives = 231/570 (40%), Gaps = 34/570 (5%)
Query: 664 ALARQEMGALADAEADWQAAAALAPEDVEALGNLGALRLSRGAAAEAMEATDAARRLAPF 723
AL + G L AE+ ++ L P AL G L+ RG A A +L
Sbjct: 27 ALEAHQAGRLDAAESLYRETLVLDPAHTGALHYFGVLQFQRGDHDTAASLMSRALKLDRH 86
Query: 724 HAGLWINAGLARQAMGGAGRPFLM--RALALDPAVAEAWTALSAEALRNPDRAAEAERTA 781
A W N GL A+G + +AL L P A+A AL+ +EA
Sbjct: 87 DAACWSNRGLVAAALGHLDEAMICYDQALQLQPDFADAHNNFGV-ALQAQGDLSEAIEQY 145
Query: 782 RRTLHLRPGDPAAVSNLGLAALALDRPAEAVAHLRLALQGRPGDLATLGNLALALERAGD 841
R L P A NLG A L +A+A R AL P N+ A + GD
Sbjct: 146 RLALASNPMLLDARLNLGTALSKLGHFDDALACYREALSLDPTSAEAHFNVGNAHKARGD 205
Query: 842 GAAAGLAWWRVILFAPGTGAGWAGLADLRQRQGRLDAALKGWGRALALEPGRAEWRYNQG 901
AA ++ R + L L + G A + RA+AL+P G
Sbjct: 206 HGAAIASFERALSLRANYTEAHINLGSLIGKLGDYAGAEAHYRRAVALKPNPTHL-VCLG 264
Query: 902 NALHAAGRPVEADAAYRQAVEDDPALTLAAFNRGYAALAQGDLAAGWTGLEARFAAGQ-- 959
+L A GR E + YRQA+ DP A N + L +GD GW R+
Sbjct: 265 GSLGAQGRLDEEEGFYRQALALDPHYADAHQNLAWLLLKRGDYRQGWAEFALRWRKSDYD 324
Query: 960 --ALPDRRFRMPAWEGGELTGKTLLVWREQGVGDELMHSACYPDLIARTLSGAGRVIVEC 1017
A+P + W G L G+ LL+ EQG GD A L+ G + C
Sbjct: 325 AIAVPG----VAEWRGESLEGRRLLLVGEQGFGDHFQFLR-----FAGVLAQRGATVELC 375
Query: 1018 --EPRLAALFARSFPQATVRAATEDPADA--DCHVPAGSLPLQLGWG-LESFATQGGWLR 1072
EP L L R A V A D D VP S+P +G L + +L
Sbjct: 376 VREP-LLPLVERI---AGVHRAFSGKPDGQYDFWVPMMSVPSCIGLDRLADIPAEVPYLF 431
Query: 1073 ADEAAVERWRGWLGGTG-SALTVGLCWRSGLRGALRDANYA-PLTDWAPILTLPGLRLIT 1130
AD+ ++ WR LG T S VGL W +G G D + L + + + +
Sbjct: 432 ADKTKIKAWRKRLGATDKSKRKVGLVW-AGSPGFGNDRYRSMQLAELDALSDIEDIAWYA 490
Query: 1131 LQYDECEAELADAERRFGIAIHRPPLDLKNDLDGAAALTAALDLVISAGTSVAEMAGALG 1190
LQ A+LA+A F H +L N + AAL LDLVI+ T VA +AGALG
Sbjct: 491 LQKGPAHAQLAEAPPAF--RAHDFTAEL-NSFEDTAALIMNLDLVIAVDTGVAHLAGALG 547
Query: 1191 VPVWRIGPA-GDWTAL-GTGCRPWYPSMRL 1218
PVW + PA DW L PWYP MRL
Sbjct: 548 KPVWLMLPANSDWRWLEARSDSPWYPGMRL 577
Score = 43.1 bits (100), Expect = 7e-08
Identities = 42/143 (29%), Positives = 58/143 (40%)
Query: 826 LATLGNLALALERAGDGAAAGLAWWRVILFAPGTGAGWAGLADLRQRQGRLDAALKGWGR 885
LA+L + AL +AG AA + ++ P L+ ++G D A R
Sbjct: 20 LASLIDAALEAHQAGRLDAAESLYRETLVLDPAHTGALHYFGVLQFQRGDHDTAASLMSR 79
Query: 886 ALALEPGRAEWRYNQGNALHAAGRPVEADAAYRQAVEDDPALTLAAFNRGYAALAQGDLA 945
AL L+ A N+G A G EA Y QA++ P A N G A AQGDL+
Sbjct: 80 ALKLDRHDAACWSNRGLVAAALGHLDEAMICYDQALQLQPDFADAHNNFGVALQAQGDLS 139
Query: 946 AGWTGLEARFAAGQALPDRRFRM 968
A+ L D R +
Sbjct: 140 EAIEQYRLALASNPMLLDARLNL 162
Score = 42.7 bits (99), Expect = 9e-08
Identities = 49/179 (27%), Positives = 66/179 (36%), Gaps = 11/179 (6%)
Query: 793 AAVSNLGLAALALDRPAEAVAHLRLALQGRPGDLATLGNLALALERAGDGAAAGLAWWRV 852
A++ + L A R A + R L P L + + GD A R
Sbjct: 21 ASLIDAALEAHQAGRLDAAESLYRETLVLDPAHTGALHYFGVLQFQRGDHDTAASLMSRA 80
Query: 853 ILFAPGTGAGWAGLADLRQRQGRLDAALKGWGRALALEPGRAEWRYNQGNALHAAGRPVE 912
+ A W+ + G LD A+ + +AL L+P A+ N G AL A G E
Sbjct: 81 LKLDRHDAACWSNRGLVAAALGHLDEAMICYDQALQLQPDFADAHNNFGVALQAQGDLSE 140
Query: 913 ADAAYRQAVEDDPALTLAAFNRGYAALAQGD-----------LAAGWTGLEARFAAGQA 960
A YR A+ +P L A N G A G L+ T EA F G A
Sbjct: 141 AIEQYRLALASNPMLLDARLNLGTALSKLGHFDDALACYREALSLDPTSAEAHFNVGNA 199