Pairwise Alignments

Query, 207 a.a., ECF RNA polymerase sigma factor RpoE from Azospirillum sp. SherDot2

Subject, 190 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

 Score = 71.6 bits (174), Expect = 9e-18
 Identities = 52/168 (30%), Positives = 83/168 (49%), Gaps = 5/168 (2%)

Query: 43  DRTAFAALFRHFAPKILHYCLKLGADRSTAEELVQDVMLTVWLKAASFDPAQATVGTWVF 102
           D  AF AL+      +  + + L      AEE+ Q+  L++ +++A+    +A+  TW+F
Sbjct: 21  DSAAFEALYARHRQGLYRFLVSLSNKAELAEEIYQETWLSL-IRSATQPQGRASFRTWLF 79

Query: 103 TIARNRRIDRLRKE--MRPAPDPDDPAMTPAS--FATPEETAQMVQSSRQLQDAIETLAE 158
            IARNR ID  RK     P  D  D  +   +   A PE+   + +   +L  A++ L E
Sbjct: 80  QIARNRLIDHWRKHGIHNPLHDSYDEQLHAQADDSAGPEQQLSLSRDQARLDAALQGLPE 139

Query: 159 NQSEVLRRSYFLEQTHEEIAEDTEVPLGTVKTRLRLALSHLKRSMRDK 206
           +Q EV       +    +IA  T  PL TVK+RLR A   L+R + ++
Sbjct: 140 DQREVFLLRLHGDLEVPQIAALTGTPLETVKSRLRYAQQKLRRLLAEE 187