Pairwise Alignments

Query, 207 a.a., ECF RNA polymerase sigma factor RpoE from Azospirillum sp. SherDot2

Subject, 191 a.a., sigma-70 family RNA polymerase sigma factor from Variovorax sp. OAS795

 Score = 77.8 bits (190), Expect = 1e-19
 Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 13/192 (6%)

Query: 18  AGSPDADRADADQFGGLVHAVAQDRDRTAFAALFRHFAPKILHYCLKLGADRSTAEELVQ 77
           A SPDA+         L+  + + RD  A   L+   AP+++   +++   R  AE+++Q
Sbjct: 3   APSPDAELI------ALIDRIGR-RDEAALRQLYDRTAPRLMGLAMRVVRQREWAEDVLQ 55

Query: 78  DVMLTVWLKAASFDPAQATVGTWVFTIARNRRIDRLRK------EMRPAPDPDDPAMTPA 131
           +  +TVW  A  +    +    W+  I R+R +D LR+      ++    D        +
Sbjct: 56  ESFMTVWRAAGDYRGTLSPPLAWLGLIVRSRSLDLLRRRTADRAQLTQEFDELMAETLES 115

Query: 132 SFATPEETAQMVQSSRQLQDAIETLAENQSEVLRRSYFLEQTHEEIAEDTEVPLGTVKTR 191
               P +TA   + +  L   +  L   Q EV+  +Y  E +H E+AE  ++PLGTVKT 
Sbjct: 116 DAPNPADTADASEQAWALHQCLSQLEARQREVVSLAYLRELSHGELAEQLKLPLGTVKTW 175

Query: 192 LRLALSHLKRSM 203
           +R  L  L+  M
Sbjct: 176 IRRGLEKLRVCM 187