Pairwise Alignments

Query, 560 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 615 a.a., tetratricopeptide repeat protein from Burkholderia phytofirmans PsJN

 Score = 75.1 bits (183), Expect = 7e-18
 Identities = 52/163 (31%), Positives = 75/163 (46%), Gaps = 7/163 (4%)

Query: 9   SHQQGDLTQAEAGYRAFLTAMPGHLQALQMLSLLLMQTRRPAEAADHFHQVAAAQPDSPD 68
           +H+ G L  AE GYRA L   P H+ AL +L +L  Q  + AEAA+   +    +P+   
Sbjct: 11  AHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDAA 70

Query: 69  QWANYASLLRGAGRPEDAEYACRRALALAPAHVAGAYNLANLLAAPPPAGTGSPLESAGW 128
              N  + L+  G+ +DA    R AL LAP+     YNL N  AA      G   ++A  
Sbjct: 71  LQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAA-----AGRHEDAADA 125

Query: 129 YQRILAVAPDHKQARNNLEVLRRKEAGRLEVAA--RRVVALDP 169
           +++ L + PD   + NN            E  A  RR + L P
Sbjct: 126 FEKSLRLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRP 168



 Score = 50.1 bits (118), Expect = 3e-10
 Identities = 68/259 (26%), Positives = 95/259 (36%), Gaps = 17/259 (6%)

Query: 1   MDLGQIIRSHQQGDLTQAEAGYRAFLTAMPGHLQALQMLSLLLMQTRRPAEAADHFHQVA 60
           ++LG  +++   G +  A   +R  LT  P    A   L        R  +AAD F +  
Sbjct: 73  LNLGNALKA--LGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADAFEKSL 130

Query: 61  AAQPDSPDQWANYASLLRGAGRPEDAEYACRRALALAPAHVAGAYNLANLLAAPPPAGTG 120
             QPD      N+ + L   GR  +A  A RR + L P H     N+   L A      G
Sbjct: 131 RLQPDDASSHNNFGNALHALGRHTEAIAAFRRTIELRPGHAGALNNMGMSLNA-----LG 185

Query: 121 SPLESAGWYQRILAVAPDHKQARNNLEVLRRKEAGRLEVAARRVVALD-----PQSVRG- 174
              E+   +Q  LA  P    A  NL           E  A    AL      P ++ G 
Sbjct: 186 RAEEAIPCFQTALAAEPRFVAAHFNLANTFDATGRHAEAVASFKAALALQPNLPPAIFGM 245

Query: 175 HDALARLLQYRSGLLDWTPGKAMTLDLGLAVKAFDHLHRVQTVHPDEPGSLRLWLALALA 234
            +ALA L ++   L        +     LA  +    H+    H   P    L  AL L 
Sbjct: 246 GNALAALGRHAEALPYLERAVGLDPQFALAWLSLGTAHQALGAH--GPAVRALDQALRLR 303

Query: 235 LDLFQLGALDDRRLSWAAR 253
            DL    A  +R L+W A+
Sbjct: 304 PDL--ASAHMNRALAWLAQ 320



 Score = 27.3 bits (59), Expect = 0.002
 Identities = 26/110 (23%), Positives = 38/110 (34%)

Query: 13  GDLTQAEAGYRAFLTAMPGHLQALQMLSLLLMQTRRPAEAADHFHQVAAAQPDSPDQWAN 72
           G   +A A ++A L   P    A+  +   L    R AEA  +  +     P     W +
Sbjct: 219 GRHAEAVASFKAALALQPNLPPAIFGMGNALAALGRHAEALPYLERAVGLDPQFALAWLS 278

Query: 73  YASLLRGAGRPEDAEYACRRALALAPAHVAGAYNLANLLAAPPPAGTGSP 122
             +  +  G    A  A  +AL L P   +   N A    A      G P
Sbjct: 279 LGTAHQALGAHGPAVRALDQALRLRPDLASAHMNRALAWLAQRDFARGLP 328