Pairwise Alignments

Query, 401 a.a., Putative acyl-CoA dehydrogenase YdbM from Azospirillum sp. SherDot2

Subject, 387 a.a., Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) from Pseudomonas stutzeri RCH2

 Score = 69.7 bits (169), Expect = 1e-16
 Identities = 92/374 (24%), Positives = 153/374 (40%), Gaps = 35/374 (9%)

Query: 28  AALSAEFATRAAEHDAAASFPFKNFERLAAFGLPALVTPEAAGGKGGGLRDALAVVNGIA 87
           A ++AE A RA   D    FP   + +    GL  +   E  GG G G    +  +  I+
Sbjct: 23  AFVAAEIAPRAEAIDQENLFPADMWRKFGEMGLLGVTVSEEYGGAGLGYLAHVVAMEEIS 82

Query: 88  SGEPSTALVLVLQYVIH-----NQLWRGSAWPEALREHIAR--SAATDGALINILRVEPE 140
            G  S A    L Y  H     NQ+ R    PE    ++ +  S    GAL         
Sbjct: 83  RGSASVA----LSYGAHSNLCVNQINRNGN-PEQKARYLPKLISGEHVGAL--------A 129

Query: 141 LGTPHRGGLPATV---ARKVPGGWRLSGTKIYSTGIPALSWLGVWARTDDAEPLVG--TW 195
           +  P+ G    ++   A K    + L+G+K + T  P  +   ++A+TD  +   G   +
Sbjct: 130 MSEPNAGSDVVSMKLRAEKRGDRYVLNGSKTWITNGPDANTYVIYAKTDLDKGAHGITAF 189

Query: 196 VVPRGTGLAEQGIEVRETWNHIGMRASGSHEVVFRDVFVPDGHAGELRPPAGWAAPDAVA 255
           +V R      +G      ++ +GMR S + E+ F DV VP  +   L    G        
Sbjct: 190 IVERDW----KGFSRGNKFDKLGMRGSNTCELFFDDVEVPQENV--LGAENGGVKVLMSG 243

Query: 256 TAWMAALFSGVYDGIARSARDWLVGFLHARKPTGLNGASLATVPRLQEALGGIEALLLTN 315
             +   + +G   GI +S  D +V ++H RK     G S+     +Q  +  +   L  +
Sbjct: 244 LDYERVVLAGGPTGIMQSCLDVVVPYIHDRKQF---GQSIGEFQFIQGKVADMYTQLNAS 300

Query: 316 RILLHSLSAAVDGGTPPSQSDALLVKYTVTNNAIDAVARALEITGNPGLSRDNPLERHHR 375
           R  L++++ A D G    +  A ++ YT   NA     +A++I G  G   + P  R  R
Sbjct: 301 RAYLYAVAQACDRGETTRKDAAGVILYT-AENATQMALQAIQILGGNGYINEFPTGRLLR 359

Query: 376 DVLCARVHAPQNDM 389
           D     + A  +++
Sbjct: 360 DAKLYEIGAGTSEI 373