Pairwise Alignments

Query, 401 a.a., Putative acyl-CoA dehydrogenase YdbM from Azospirillum sp. SherDot2

Subject, 394 a.a., acyl-CoA dehydrogenase from Herbaspirillum seropedicae SmR1

 Score = 78.6 bits (192), Expect = 3e-19
 Identities = 104/413 (25%), Positives = 158/413 (38%), Gaps = 56/413 (13%)

Query: 4   DDLPFQASPFAGTAPALAVDPSLIAALSAEFATRAAEHDAAASFPFKNFERLAAFGLPAL 63
           D  P Q    A   P   VD   +  L AE   R  E D     P      +   G+   
Sbjct: 7   DVYPVQKKVVAALPPH--VDSPEMDTLIAEVTARRDEFDQLGHVPRDLIATMKQAGIFRS 64

Query: 64  VTPEAAGGKGGGLRDALAVVNGIASGEPSTALVLVLQYVIHNQLWRGSA--WPEALREHI 121
            TP   GG+       LA+V  I+  + S   V             GSA  +  AL    
Sbjct: 65  STPRRFGGEPLAPAPFLAMVERISRADGSAGWVAAF----------GSANTYLAALPIET 114

Query: 122 ARSAATDGALINILRVEPELGTPHRGGL-PATVARKVPGGWRLSGTKIYSTGIPALSWLG 180
            R    DG               + GGL P   A+ VPGGW +SG   +++G     W+G
Sbjct: 115 QRQIYADGP-----------DQVYAGGLYPLQEAKPVPGGWNISGRWHFASGCKGADWIG 163

Query: 181 VWART---DDAEPLVGTWVVPRGTGLAEQGIEVRETWNHIGMRASGSHEVVFRDVFVPD- 236
           V  +    D+  P      V     +    +E+ + WN +GM+ +GSH+   +D FV   
Sbjct: 164 VGIKDGGGDEGAPRPALMAV-----MPAAEVEIIDNWNVVGMQGTGSHDTRLKDKFVAHE 218

Query: 237 -----GHAGELRPPAGWAAPDAVATAWMAALFSGVYDGIARSARDWLVGFLHARK--PTG 289
                G  G +  P  +  P   A A+ A + + V  G+AR+A D +       K  P  
Sbjct: 219 WTCARGAPGLIDEPL-YRYP---ALAYQAEVHAAVNIGLARAALDIVTDMAGGAKIMPGA 274

Query: 290 LNGASLATVPRLQEALGGIEALLLTNRILLHSLS----AAVDGGTPPSQSDALLVKYTVT 345
           L    LA     +  LG  EA   + R+  +         +  G P S+   +++K + T
Sbjct: 275 LR---LADRAYYKIKLGLSEAKWRSARMFFYDACEQAWEQILAGNPISEETDMMLKLSAT 331

Query: 346 NNA---IDAVARALEITGNPGLSRDNPLERHHRDVLCARVHAPQNDMILTGAG 395
             A   ++ V  A +  G   + R + L+R  RD +    HA  +++    AG
Sbjct: 332 YAARVSMEVVNDAYQAAGMAAIQRSHRLQRIVRDAMVVTQHAALSELNYESAG 384