Pairwise Alignments

Query, 470 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 466 a.a., Lipid A core - O-antigen ligase from Alteromonas macleodii MIT1002

 Score = 68.2 bits (165), Expect = 6e-16
 Identities = 117/479 (24%), Positives = 191/479 (39%), Gaps = 59/479 (12%)

Query: 1   MRPRRLHFWIFLATVSLAPLPLGANRPLAWTALAMAMAVLSILWPLAVLRERGAPSNGLG 60
           ++  +  F   L T+   PL LGANRP AW    M M++ SI   L +L      ++ L 
Sbjct: 5   LKTEKFLFGFLLFTLFWLPLSLGANRPWAWAL--MQMSLFSIGGTLVLLN-----TSLLH 57

Query: 61  PLAIPGVAFLCVAGWAAAQTW----LAP-PFVAWHPLWTD-VAALLS--------VAPKT 106
            L      F+ +  W     W    + P PF     +  + V+ LLS        V  K 
Sbjct: 58  QLYTKYRTFIIL--WVIFLAWQLINIVPLPFALVEAIRPERVSYLLSEQWGNQENVTSKW 115

Query: 107 VGRLGLAPSAAAEGLVRLSCYALTFWLAYQHAASGRRADALVDGLAVVAALYALYGLAAF 166
           +  L      +     +   Y   F++A     S +R    +  ++      A+YG    
Sbjct: 116 LS-LSFDVGQSDVTFFKSLAYCFLFFIALTLINSAKRLRYTLIVISAAGIFQAIYGALEV 174

Query: 167 NADPPMVLWMEKWAYRDNLTSTFVNRNSYATYAGLGLLAASAAVVRRLEGGG------RR 220
            +     L + K       T +++ +N YA +  L L AA   ++  L          R 
Sbjct: 175 LSGIKYSL-VFKQPVSHIATGSYIYKNHYANFLMLCLSAAIGYLIASLHQDNTTTKRERL 233

Query: 221 SRLLRHLARPTLFYLLTAIPVIAALVATGSRGGMAAAAVGMAVFA-YGLL--SPRWGWPR 277
            RL++      + + +  I ++ ALV + SR G +A  + M + A  GL+   PR    +
Sbjct: 234 RRLVKFWLSNKVLFRIGIIIMVIALVMSRSRMGNSAFFIAMTITATLGLIYFKPR----Q 289

Query: 278 RAMAGAALAGAVVLAFLVFLDHGA---------THPASEAADRLRVYVVTAGLIAESPWT 328
           ++     ++  ++   LV    G          T+ A E+ D   V      L+ E    
Sbjct: 290 KSYITLFISMLIIDILLVSSFFGLKQVQQRLEQTNFAQESRDE--VITDALPLLGEYGLI 347

Query: 329 GYGLGSFPDVFAMARPASISQVWLQAHNLYLELAMELGIPAALGLLSAIAWVFAACLRAA 388
           G G G+F  V+   +  SI   +  AHN YL+ ++E G+  A  L   +       L A 
Sbjct: 348 GTGGGTFYTVYPQFQSESIQHFYDHAHNEYLQFSIEFGVVGAFVLALLVLLCTKNALSAV 407

Query: 389 FRHRGRRVHVSLGCA-----ATALVAVHSLVDFSMQIPAVAITWAAIAGTAMGCAARHV 442
              R RR  +  G A     AT  +A+HS VDF +Q PA    +  +   A+G  +R +
Sbjct: 408 ---RNRRHPLPRGTAFASIMATIGMALHSSVDFPLQAPANTAIFIVL--LALGALSRDI 461