Pairwise Alignments

Query, 414 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 375 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Pseudomonas sp. DMC3

 Score =  105 bits (262), Expect = 2e-27
 Identities = 95/347 (27%), Positives = 153/347 (44%), Gaps = 20/347 (5%)

Query: 19  LKAGAAAAAVTALPFAAPSVLRAQTPVVKIGILQPVTGALAHDGDLGRAGAEMAINEINA 78
           L A    A V +  FAA ++        KIGI  P TG +A  GD+  +GA+MAI +INA
Sbjct: 11  LFAAMVLAGVASHSFAADTI--------KIGIAGPKTGPVAQYGDMQFSGAKMAIEQINA 62

Query: 79  AGGIKSLGGAKLEMLFGDARSTPEAGTQEVERMQAEGVSAIVGGFASPICLAASQAAARY 138
            GG+    G KLE +  D    P+       ++  +GV  +VG   S     AS      
Sbjct: 63  KGGV---DGKKLEAVEYDDACDPKQAVAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDE 119

Query: 139 DLPYLVDVGVSDQIMARGLTNTFRFSPGFGKVTQVALDNLTAINDKAGKPAKTVVLVHED 198
            +  +     S  I ARG    FR + G       A  N  A + K     K V ++H+ 
Sbjct: 120 GVIMITPAATSPDITARGYKMIFR-TIGLDSAQGPAAGNYIADHVK----PKVVGVLHDK 174

Query: 199 GLFGSGLAKLLQSELPKRGFEILETIAHPTPARDMSNVALRIRSLNPDLVIPSNYYGEFV 258
             +G G+A  ++S L K+G ++          +D S +  +++    D V    Y+ E  
Sbjct: 175 QQYGEGIATAVKSTLEKKGTKVAVFEGVNAGDKDFSAIIAKLKQAGVDFVYYGGYHPELG 234

Query: 259 LLARTMQQQRIKPKGIYAILGGAASNGRFVKEFPQAAQNVIDCNHWHDPKN-PKALALRK 317
           L+ R  Q++ +K + +     G  S  +  K+  +     +  +   DP N   A A + 
Sbjct: 235 LILRQAQEKGLKARFMGPEGVGNDSITQIAKDASEGLLVTLPKSFDQDPANVALADAFKA 294

Query: 318 AVEGQGKSFAYNVSLNYSNVLLLADAIESAGSSDRKKIIEALNASTF 364
             E     F +    +YS V ++A+ I++A S D  K+ EA++A +F
Sbjct: 295 KKEDPSGPFVFP---SYSAVTVIAEGIKAAKSEDATKVAEAIHAGSF 338