Pairwise Alignments

Query, 414 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 398 a.a., Putative branched-chain amino acid transporter substrate-binding protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 92.0 bits (227), Expect = 3e-23
 Identities = 105/406 (25%), Positives = 177/406 (43%), Gaps = 20/406 (4%)

Query: 10  LAGISRRTVLKAGAAAAAVTALPFAAPSVLRAQTPVVKIGILQPVTGALAHDGDLGRAGA 69
           +A  +RR V+++  AAA V A+ FA P +L AQ   V+IG     TG       + +   
Sbjct: 1   MAHPNRRLVIQS--AAATVGAMSFA-PQLL-AQPAPVRIGYSMSRTGPWTGGAQVSQEPN 56

Query: 70  EMA-INEINAAGGIKSLG-GAKLEMLFGDARSTPEAGTQEVER-MQAEGVSAIVGGFASP 126
            +    + NAAGG+   G   K+E++  D RS  E   +  E+ M ++ V  ++  + S 
Sbjct: 57  YLLWAEQQNAAGGLDVKGVRRKIELISSDDRSDMETVVRTYEKLMGSDKVDLVLPPWGSN 116

Query: 127 ICLAASQAAARYDLPYLVDVGVSDQIMARGLTNTFRFSPGFGKVTQVALDNLTAINDKAG 186
              A +  A R   P+L    +S ++    L   F        +    +D   A      
Sbjct: 117 ANFAVAPLANRLGYPFLAPTALSRRLAEMKLPYFFLLLQQPKPMCDALVDMFKASG---- 172

Query: 187 KPAKTVVLVHEDGLFGSGLAKLLQSELPKRGFEILETIAHPTPARDMSNVALRIRSLNPD 246
              KTV +++ D LFG       +  L   G  ++E  ++P   +D+S V   ++  NPD
Sbjct: 173 --VKTVAVIYVDDLFGLENYAAFKVALQGSGITMVEDKSYPGGVKDLSPVLRSMKDKNPD 230

Query: 247 LVIPSNYYGEFVLLARTMQQQRIKPKGIYAILGGAASNGRFVKEFPQAAQNVIDCNHWHD 306
             +   Y  + +L +R  ++    PK  YA +G A    + V   P  A+ V+    W+ 
Sbjct: 231 AFVGFTYPPDTILASRQAKEIGFNPKFFYASVGTAFPLYKNVMT-PAGAEGVLGMGSWNG 289

Query: 307 PKNPKALALRKA-VEGQGKS-FAYNVSLNYSNVLLLADAIESAGSSDRKKIIEALNASTF 364
             +P A A   A V  Q K    +     ++ + +L +A+++ G  DRK I + +  +T 
Sbjct: 290 KTSPGAKAYFDAHVASQKKEPDRWASGACWAGLEILTNAVKAQG-LDRKAIRDYVANTT- 347

Query: 365 AGHIMPYGPTKFVNGQNEGATPINTQIQGEDIKAIFPEAFAEAKAN 410
             H    G  KF   +N G      Q Q  + + ++P+  A AK N
Sbjct: 348 --HKTIIGDIKFSGSENVGTPGTVGQWQNGEFEVVWPQKVATAKLN 391