Pairwise Alignments

Query, 306 a.a., HTH-type transcriptional regulator PgrR from Azospirillum sp. SherDot2

Subject, 298 a.a., Transcriptional regulator, LysR family, in formaldehyde detoxification operon from Pseudomonas fluorescens GW456-L13

 Score =  211 bits (536), Expect = 2e-59
 Identities = 117/296 (39%), Positives = 181/296 (61%), Gaps = 5/296 (1%)

Query: 2   DRLDDLTVLVEVVDSGSLSAAAERLGLSASAISRRIAQMENRLGTRLLARTTRRIALTDA 61
           +R + +   V V +    +AAA+RLG+S+S ISR+I ++E RL TRLL R+TRR+ LT+A
Sbjct: 4   NRWEGIDEFVAVAECSQFTAAAQRLGVSSSHISRQIVRLEERLQTRLLYRSTRRVTLTEA 63

Query: 62  GATFCLRARAILAALDEAEQSLTEMGEEPRGTLRITMPVLFGQMRVAPLLASYLRRYPGV 121
           G TF    + +    +EA +++ ++  EP+G LR+T  V +G+  + PL+  ++  YP +
Sbjct: 64  GQTFLQHCQRLQDGREEALRAVGDLTSEPKGMLRMTCAVAYGERFIVPLVTRFMGLYPQL 123

Query: 122 SLEVSLNDRVQRLVEEGFDLAIRAGRLADSSLIARRLRPLRRHVVASPDYLERRGVPQSP 181
            +++ L++R   LV EG DLAIR GRL DS L+A RL P R  + ASP Y+ER G P S 
Sbjct: 124 RIDIELSNRQLDLVHEGLDLAIRLGRLQDSRLVATRLAPRRMFLCASPSYIERYGRPHSL 183

Query: 182 ADLVRHECLTLLSGSGRTEWEFMAGDRREILRPSGSFQADSLWLLRHAAVGGLGLARLAD 241
           ++L RH CL    GS    W+     R    R  G+++ +S   +  AA+ G+GL +L D
Sbjct: 184 SELSRHNCLI---GSSDL-WQLEQNGREYSQRVQGNWRCNSGQAVLDAALQGVGLCQLPD 239

Query: 242 FIVEEDIRAGRLVPLLSELEVTDEAIHVVYPATRHVSPKVRSFIEHLLTGL-NKPE 296
           + V E +++G L+ LL   +  + A+  +YP  RH+SPKVR  +++L  GL  +PE
Sbjct: 240 YYVLEHLKSGALISLLEAHQPPNTAVWALYPQQRHLSPKVRKLVDYLKEGLAQRPE 295