Pairwise Alignments

Query, 299 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Azospirillum sp. SherDot2

Subject, 309 a.a., Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  120 bits (300), Expect = 5e-32
 Identities = 88/304 (28%), Positives = 144/304 (47%), Gaps = 18/304 (5%)

Query: 1   MIQILIDTLIRTSDLALIALGLNLSYGVSRFPNVAHVEMAPLGAAVALAVAALFPGGG-- 58
           ++Q +I+ L+  S  ALIALG  + YG+    N AH E+  +GA  +  +  L   G   
Sbjct: 4   LLQQIINGLVLGSMYALIALGYTMVYGIINLINFAHGEVLMVGALTSWTIIGLMKDGMPN 63

Query: 59  ------LVGAAVAGALAAGLAAMLLHRFAFERLAGAGPASALIGSLAIAMMLRAGLQAVF 112
                 L+ A V   + A     ++ + A+  L  +   + LI ++ ++++L+     ++
Sbjct: 64  TPGWLILLIALVIACIVAATLNFVIEKVAYRPLRNSPKLAPLITAIGMSILLQTLAMIIW 123

Query: 113 GTRPQQFDTPL-TPPHDLWGAILSDLQIAAIAITAVCLIGFFAMLRLTPLGRSIRAIAAN 171
               + +   L T P  + GA++S  Q+  +++TA  L+    ++  T LGR++RA A N
Sbjct: 124 KPTNKAYPNLLPTDPIHVAGAVISPTQVMILSVTAFSLVVLMWLVNYTKLGRAMRATAEN 183

Query: 172 PALATASGIDARRVTLITVFLGGTLAGIGGILLALVTQLDIGMGQMLLLP---VFAAAIV 228
           P +A   GI    V   T  +G  LA I G++ A  +   I    M  LP    F AA+ 
Sbjct: 184 PRVAALMGIRPDMVISATFIIGAVLAAIAGVMYA--SNYGIAQHAMGFLPGLKAFTAAVF 241

Query: 229 GGLGSLPGAVIGAFAIALAETLVMRIDFGLLAADGPRYLPLGYLTGIGFALIVVTLVYRP 288
           GG+G+L GAV+G   + L E     I  G +       L   Y     F +++V L  RP
Sbjct: 242 GGIGNLAGAVVGGILLGLIEA----IGSGYIGTITGGVLGSNYSDIFAFIVLIVMLTLRP 297

Query: 289 EGLL 292
            GLL
Sbjct: 298 SGLL 301