Pairwise Alignments

Query, 570 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 700 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  189 bits (479), Expect = 4e-52
 Identities = 138/509 (27%), Positives = 241/509 (47%), Gaps = 24/509 (4%)

Query: 25  IAAFLLLFLVVPVVQVIFVAFQDKTTGAFTLVNFADFFQNDLFMRSFGNSFYVSAMSVVV 84
           I   +++F+V P + +    F+D   G +T   F         +    NS  +     V 
Sbjct: 155 IILLIVIFIVYPSIAIFLPMFKDDM-GNWTAWQFMTILSQSHTLTVIYNSIALGIAVGVG 213

Query: 85  ASLLALPLAYLTTRFEFRGSVLIQSLGIIPLIMPPFIGAVAMQLLFGRNGSVNLLLRDHF 144
           A+   L  A  TTR   R + + +   I+P++ PPFI  + + L+ GR+G +  L+ D F
Sbjct: 214 ATFFGLIFAIYTTRIAKRSAFIARVFSILPIVTPPFIVGLGVTLMLGRSGYITELMVDGF 273

Query: 145 GFS-IPFMEGLNGVIFVQSIHYFPFILINLSASLKNIDRAMEESAQNLGCHGFRLFRRIV 203
           G     ++ G  G+   Q + + P   + L  +LK++  ++EE++  L  + ++ F  I+
Sbjct: 274 GLQKTNWLYGFTGIWLAQVLAFAPMSFMILDGALKSLHPSLEEASYTLKANRYQTFFGII 333

Query: 204 FPLAMPGYVAGASLVFIKVFDDLGTPLLLNVN-DMLAPQAYLRISSIGIADPMGYVISVV 262
            PL  P       ++F++   D   PL+L  + D+LA Q Y  I+   +       +  V
Sbjct: 334 MPLLKPALANSFLIIFVQSLADFSNPLVLGGSFDVLATQIYFYIAGAQLDYASASTLGSV 393

Query: 263 LIACSLLALWVSALAMRGKDYATVQ----RGGGGLAKRRLKPLEMVAAYGIVLLILVLVL 318
           L+  SL    V  L +  + Y T+     RG        LK    V  Y  ++  ++L  
Sbjct: 394 LLLFSLAIFVVQYLWIGQRSYVTISGKAYRGDVQEMPASLKLGVTVTLYAWMIFNVLLYG 453

Query: 319 APHVGLGLLSFATIWSFSPLPDAFTLKHYHTVFSES---GQY--ITNTLLYASLAALLDV 373
           +   G    SF   W    +    T K+Y  +F      G +  +  T++YA +AA +  
Sbjct: 454 SIFFG----SFTVNWG---VDYTLTFKNYLNLFGNGMSDGAWPSLITTMIYAGVAAPITA 506

Query: 374 VIGTAIAYLVLRTKLPGRQWLDYIAMAALAVPGVVLGIGYLRSFYGVPMPFTGQPLSNFW 433
           + G  IAY+V+R +  G++ +++  M   AVPG V G+ Y+ +F   P+  TG       
Sbjct: 507 LFGLLIAYVVVRQQFYGKKVIEFSTMLCFAVPGTVAGVSYILAFNDAPIYLTGTAA---- 562

Query: 434 LILVFALAIRRLPYALRACTAALQQVSSSLEEAAENLGATKLRTVGRIVVPLMSGGILAG 493
            I+V ++ +R +P  +R+  A L Q+  SL+EA+ +L A+ L+T+  I++PL+   IL+ 
Sbjct: 563 -IVVISMVMRNVPVGIRSGIAGLGQLDKSLDEASLSLRASSLQTIRYIILPLLRPAILST 621

Query: 494 FVTSFATAAVELSATIMLVHSQSDAPLAY 522
            V SF  A   +SA I LV  ++    +Y
Sbjct: 622 LVYSFVRAMTTVSAIIFLVTPETRVATSY 650



 Score = 45.1 bits (105), Expect = 1e-08
 Identities = 48/250 (19%), Positives = 103/250 (41%), Gaps = 24/250 (9%)

Query: 30  LLFLVVPVVQVIFVAFQDKTTGAFTLV--NFADFFQN---DLFMRSFGNSFYVSAMSVVV 84
           ++F V+    + F +F       +TL   N+ + F N   D    S   +   + ++  +
Sbjct: 445 MIFNVLLYGSIFFGSFTVNWGVDYTLTFKNYLNLFGNGMSDGAWPSLITTMIYAGVAAPI 504

Query: 85  ASLLALPLAYLTTRFEFRGSVLIQSLGIIPLIMPPFIGAVAMQLLFGRNGSVNLLLRDHF 144
            +L  L +AY+  R +F G  +I+   ++   +P  +  V+  L F              
Sbjct: 505 TALFGLLIAYVVVRQQFYGKKVIEFSTMLCFAVPGTVAGVSYILAFND------------ 552

Query: 145 GFSIPFMEGLNGVIFVQSI-HYFPFILINLSASLKNIDRAMEESAQNLGCHGFRLFRRIV 203
             +  ++ G   ++ +  +    P  + +  A L  +D++++E++ +L     +  R I+
Sbjct: 553 --APIYLTGTAAIVVISMVMRNVPVGIRSGIAGLGQLDKSLDEASLSLRASSLQTIRYII 610

Query: 204 FPLAMPGYVAGASLVFIKVFDDLGTPLLLNVNDMLAPQAYL----RISSIGIADPMGYVI 259
            PL  P  ++     F++    +   + L   +     +Y+         GIA   G V+
Sbjct: 611 LPLLRPAILSTLVYSFVRAMTTVSAIIFLVTPETRVATSYILNRVEDGEYGIAIAYGSVL 670

Query: 260 SVVLIACSLL 269
            VV++A  LL
Sbjct: 671 IVVMLAIILL 680