Pairwise Alignments

Query, 222 a.a., putative glutamine ABC transporter permease protein GlnM from Azospirillum sp. SherDot2

Subject, 265 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  139 bits (349), Expect = 7e-38
 Identities = 78/199 (39%), Positives = 114/199 (57%), Gaps = 1/199 (0%)

Query: 5   NFQQLWRYQDQLIDGTLHTLLLTLVAAAIGTAIGVAAAAAVRSGPRPVRWAIRGYVELIR 64
           +F  LW Y+  L+ G  +TL+ T+V   +G AIG+       S    +   IR Y+E+ R
Sbjct: 48  DFGVLWSYRRLLLIGLAYTLVFTVVCVVLGLAIGLITGLGRLSRNPWISAPIRAYIEVFR 107

Query: 65  NTPSLIQLFVVFFVLPGF-GLRMGAFEAASIALGLYFGAYCTEIVRAGLDAIPGSQVEAG 123
            TP L+QL   ++ LP   GL + A  AA++ L LY GA+ +EIVR G+ +I   QVEA 
Sbjct: 108 CTPVLVQLVWFYYALPVLTGLEISAVAAATLCLSLYGGAFYSEIVRGGIISIDNGQVEAA 167

Query: 124 QCLGLTRWQVFRHIVLPPALRSVYPAFTSQFVLLLLGTSLASQISAEELFHTGGFIETRT 183
           + LG+TR Q+ R IVLP A + + P   SQ ++ L  TSL S ++  +L + G  I   T
Sbjct: 168 RALGMTRMQLMRRIVLPQAFKRMVPPLMSQSIMQLKNTSLLSVLAVPDLLYQGQVIAHET 227

Query: 184 YRSFEVYAVICGIYFALVM 202
           YR  E+Y  I   YFA+++
Sbjct: 228 YRPLELYTFIAVAYFAVLL 246