Pairwise Alignments

Query, 562 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 541 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25

 Score =  169 bits (427), Expect = 3e-46
 Identities = 130/564 (23%), Positives = 262/564 (46%), Gaps = 30/564 (5%)

Query: 2   NMKVAHKLVLGFGVVCVLTALLALYQMSRFSDALSVIMAVSSYDTEAADMVVQVGNQQAE 61
           ++ +A +  LGF ++ +L ALL  + +S  +   +  + V S       +V  +      
Sbjct: 5   SLSIARRAGLGFALIALLVALLGFFALSNMASIRASAVQVESGLVPKMRLVADIREIMLR 64

Query: 62  LRSTREAALNAVSVANAEGRAADIPAIMAPMRSQYEQTGLKLRETLGKLRSMVAERSQNS 121
           +R+    +L      N        PA +A  RSQ +     L + L +L +++      S
Sbjct: 65  IRTI---SLRMALDPN--------PASLAQYRSQMDTRSQDLTKRLAELDAVIDTPEVRS 113

Query: 122 VTDSRRKGWVELDTSVTEMNRAIGAVGDEARTIYTLLERNQVSEALQRRQRVDELRKLME 181
           + D       +   S+    + +          + L ++ Q +E L +   VD ++ +++
Sbjct: 114 LYD-------QFQVSLRLYQQGLAQS-------FVLADKQQGAE-LNKLLLVD-MKTVVD 157

Query: 182 QRIDAAQTAIDHLTAAGRDDIRAIYNSAIQSSVIALVAVFLIA---VGVAYTIGSSITRR 238
                     D+  A      +   +   +S  + +  V L A   V +A+ +  SI   
Sbjct: 158 GSGAQLNALADYYNAQVNQQGQEAESQYSRSRTMVVGFVLLAALSTVALAWLLTRSIVGP 217

Query: 239 LGRAIDFVTKVGHGDLTQEIMIAGKDELAILGQHLNEMAGRLKSMARTTRETAESVHAAT 298
           L  A+     V HGDLTQ + + G DE+  L   L  M   L+   +  R++A  + ++ 
Sbjct: 218 LSHAVRAAENVAHGDLTQTVDVTGDDEVTRLLVALKTMQSNLRGTLQLIRQSAGQMASSA 277

Query: 299 AQIRASTQQQSASVAEQLAAVEQTTATLSEITESGAQINRRAQDVSHGAQTVAASSHSGM 358
             +   T Q S S+ +Q A +EQ    ++E+T +  ++ R A   S   +    ++  G 
Sbjct: 278 TDLNGITDQSSRSLQKQTAEIEQAATAVNEMTSAADEVARNAVSTSESTRLSNETAREGQ 337

Query: 359 KAVDDTIQAMDAIREQAEAVAENIVMLSERTQAIGEIIVTVNDIAERCHLLALNAAIEAA 418
             V +T+ A+ A+       +  +  L+E+++ IG+++  +  IAE+ +LLALNAAIEAA
Sbjct: 338 HRVGETVNAIQALSSNIGETSTLVQNLAEQSRDIGKVLDVIRSIAEQTNLLALNAAIEAA 397

Query: 419 AAGEHGRTFSIVAGEIKSLADQSKEATSQVRSNLSEIQHGINASVMLTEEAVKRVAAGKR 478
            AGE GR F++VA E+++LA +++++T ++   ++ ++ G + ++   + + +R      
Sbjct: 398 RAGESGRGFAVVADEVRALAHRTQQSTLEIDQMVTAMRTGSDHALTSMQSSTQRATDTLA 457

Query: 479 QTDATQSTIRTMAENIQESVLAFQQIVAGTNQQQIGLEQVIQALQNIREASSQTAAGTRQ 538
             +     +  + ++I +       I +   +Q    ++V + + NIR+ S+Q+++G  Q
Sbjct: 458 LAEGAGGALSQITDSIDQIHQRNLVIASAAEEQAQVAKEVDRNIVNIRDLSAQSSSGAGQ 517

Query: 539 LEGAAANLNNLGQGLVEAVRNYQV 562
           + G++  L  L   L EAV  +Q+
Sbjct: 518 INGSSRELAQLAVALNEAVARFQL 541