Pairwise Alignments

Query, 407 a.a., Inner membrane protein YdcO from Azospirillum sp. SherDot2

Subject, 401 a.a., Inner membrane protein YdcO from Pseudomonas lactucae CFBP13502

 Score =  236 bits (602), Expect = 9e-67
 Identities = 131/377 (34%), Positives = 204/377 (54%), Gaps = 1/377 (0%)

Query: 21  RGLSPSALATGGLVALVGYASSVAVVIQGLAAVGADTAQITSGLVAVGFSMGLSAIWLAW 80
           + LS SA+  G +  ++ YA  + +V Q          +++S + A+    G++ ++L+W
Sbjct: 6   KDLSLSAVIAGFIAVIISYAGPLIIVFQAAKEAHLPNDEVSSWIWAISIGSGITGLFLSW 65

Query: 81  TQRKPISVAWTTPGMALLAATGPVAGGFPAAVGAFLTVGALIMVAGLWRPLGRWIAAIPK 140
             R P+  AW+TPG ALL +  P       A+GA++    +I V GL     + ++ +PK
Sbjct: 66  RLRVPVITAWSTPGAALLVSMLPTVT-LAQAIGAYVVASVIIAVVGLSGAFDKLMSRLPK 124

Query: 141 PLANGMLAGLLLKLCLAPFMAIGQAPGLGLLVLATWAIVGRFARLYAVPAAVAVALAAMA 200
            +A  MLAG+L +     F +I   P L L +LAT+ +  RF+  YA+ + + +  A  A
Sbjct: 125 AIAAAMLAGILFRFGAELFTSIKLQPALVLAMLATYLVFKRFSPRYAILSVLIIGCAVAA 184

Query: 201 MNPPVSGALPADPWPTLSLVAPAFTWEALVGLALPLFVVTMASQNIPGLAVLATFGYTPR 260
               ++             +AP ++W A++ + LPL +VT+  Q +PG+AVL T GY   
Sbjct: 185 SFGELNSGAITIAVAQPVFIAPQWSWHAIINIGLPLALVTLTGQYVPGMAVLRTAGYNTP 244

Query: 261 VPPAFLATGFASALTAPLGAPTVNLAAITAAMCAGPDADPRPERRWQAAVTGGVGYIALT 320
                  T   S L AP G+   NLAAITAA+C G +A    ++R+ A +  GV YI + 
Sbjct: 245 ARSIISVTAIGSILMAPFGSHGFNLAAITAAICTGREAHEDRDKRYIAGIACGVFYILMG 304

Query: 321 ALAAVTATLVTRSPPILIEAVAGLALIGAFGGSLLAAVQAEEERIPALVTLLVTASGLSF 380
              A  A++ +  P  LI ++AGLAL GA    L  A+  E++R  AL+T LVTASG+SF
Sbjct: 305 IFGATLASVFSALPKELIASLAGLALFGAISAGLTGAMADEKQREAALITFLVTASGMSF 364

Query: 381 FGVGSAFWGLLFGGAMH 397
            G+ +AFWGL+FG   H
Sbjct: 365 LGLAAAFWGLIFGLVAH 381