Pairwise Alignments

Query, 407 a.a., Inner membrane protein YdcO from Azospirillum sp. SherDot2

Subject, 389 a.a., benzoate transporter from Herbaspirillum seropedicae SmR1

 Score =  207 bits (526), Expect = 6e-58
 Identities = 135/380 (35%), Positives = 196/380 (51%), Gaps = 9/380 (2%)

Query: 24  SPSALATGGLVALVGYASSVAVVIQGLAAVGADTAQITSGLVAVGFSMGLSAIWLAWTQR 83
           S +A   G L  L+ YA  + + +Q   A     AQ+ S +  +    G+S + L+   R
Sbjct: 7   SLTAWVAGFLAVLISYAGPLVIFVQAAHAGQVPQAQLVSWVWGISMGAGVSGLLLSGWFR 66

Query: 84  KPISVAWTTPGMALLAATGPVAGGFPAAVGAFLTVGALIMVAGLWRPLGRWIAAIPKPLA 143
            PI  AW+ PG ALL +  P     P  VGA+L    L+++ G+     + +A IPK +A
Sbjct: 67  LPIITAWSAPGTALLLSLFPGIS-MPEVVGAYLMAAVLLILIGVTGYFEKILAFIPKGIA 125

Query: 144 NGMLAGLLLKLCLAPFMAIGQAPGLGLLVLATWAIVGRFARLYAVPAAVAVALA-AMAMN 202
            GM+AG+LL+  L  F +   AP +   +LA +    R+   Y +        A A A  
Sbjct: 126 AGMMAGILLQFGLQAFRSSVAAPLMVAAMLAAYLAGRRWWPRYGIVVVALTGFAVAFASG 185

Query: 203 PPVSGALP---ADPWPTLSLVAPAFTWEALVGLALPLFVVTMASQNIPGLAVLATFGYTP 259
               GAL    A+P      +AP F+      L +PL +V++  Q +PG+AVL   GY P
Sbjct: 186 QTALGALQLQLAEP----VFIAPHFSVGVFFSLTVPLVLVSLTGQFLPGMAVLQLAGYHP 241

Query: 260 RVPPAFLATGFASALTAPLGAPTVNLAAITAAMCAGPDADPRPERRWQAAVTGGVGYIAL 319
                   TG AS  TA  G  T+ LAAITA++C G DA P P +R+ A +  GV Y+  
Sbjct: 242 STRAVVTGTGLASLATACFGGITIVLAAITASLCTGKDAHPDPGKRYIAGIANGVFYLIG 301

Query: 320 TALAAVTATLVTRSPPILIEAVAGLALIGAFGGSLLAAVQAEEERIPALVTLLVTASGLS 379
              AA   TL T  P  LI A+AGLALIGA   ++    +  +   P+++T L TASG++
Sbjct: 302 GTFAASIVTLFTAFPKELIAALAGLALIGAIVSNIRLMSEEGDYVEPSVITFLATASGMT 361

Query: 380 FFGVGSAFWGLLFGGAMHVL 399
            FG+G+AFWG++ G A + L
Sbjct: 362 LFGLGAAFWGVMVGMAAYWL 381