Pairwise Alignments

Query, 293 a.a., Ribose import binding protein RbsB from Azospirillum sp. SherDot2

Subject, 312 a.a., substrate-binding domain-containing protein from Dickeya dadantii 3937

 Score =  140 bits (352), Expect = 5e-38
 Identities = 94/269 (34%), Positives = 147/269 (54%), Gaps = 11/269 (4%)

Query: 1   MRKLLTAATVAATALLASANAQAADTIALVVSTLN--NPFFVTLKNGAEAKAKALGYNLL 58
           M+K+   A  AA A   S+    A    +V ST N   PF V ++  A   AK LG NL 
Sbjct: 1   MKKITIMA--AAMAFTMSSGLAQAQNEQIVFSTPNLAMPFEVHMQRTAVKAAKELGVNLQ 58

Query: 59  VLDSQNDPAKELANVEDVVNKKVKLLLVNPTDSDAVRSAVRSANRAKIPVVTLDRSANGG 118
           VLDSQ    K++A++E+ + +  +  +V+P D +AV  AV     AK+PVVTLDRS    
Sbjct: 59  VLDSQGSSPKQVADLENAITRGAQGFVVSPNDVNAVSGAVTEIQDAKLPVVTLDRSVKTD 118

Query: 119 EVASHIASDNVAGGRMAGQLVVDMLKGQGAVVELQGLPGASAARDRGKGFHEAVDKASGL 178
           +   H  ++N  GG+     V         +V L G PG+S+  +R +G  +++ KA G 
Sbjct: 119 KKVPHFGANNYKGGQAIADFVKARFPNGADIVLLTGQPGSSSNIERTQGIRDSL-KAGGS 177

Query: 179 K--VVASQPADFDRTKALNVMENILQA-QQKIDVVFAHNDEMALGAAKAIQASGRK---I 232
           K  +VA Q  ++ R++ + ++E++L +  ++  V+ + ND+MALGA +A+Q+ G K   +
Sbjct: 178 KYRLVADQTGNWMRSEGMRIVESVLPSLPKRPQVILSANDDMALGAIEALQSQGLKPGEV 237

Query: 233 PVVGFDGTDEGVAAVNAGTLTATVAQQAG 261
            V GFD   E +A V  G L+ T  Q+ G
Sbjct: 238 MVTGFDAVPEALARVRDGWLSVTADQRPG 266