Pairwise Alignments

Query, 283 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

 Score =  112 bits (281), Expect = 7e-30
 Identities = 71/254 (27%), Positives = 127/254 (50%), Gaps = 20/254 (7%)

Query: 22  LVVFFVIPFGLMIAVSVARRIPGGFYEPDLVLANYERFLSAFFGGVLSFSLELAALVAVV 81
           LV+F +IP  ++I  S   R      +      NY R L   +G V+  S  +A +  ++
Sbjct: 20  LVLFVLIPNLMIIGTSFLTRDEANLIKFAFTFENYTRLLDPLYGKVMLHSFYMAIVATLI 79

Query: 82  AVGIGFPFTYRLARLPRAAQVRWLVFLLSILSLSEVIIGFAWSTLLSRTAG--------- 132
            + IG+PF Y +A++P     +W  F+L +     +I+ F W+  L RT G         
Sbjct: 80  CLVIGYPFAYIVAKMPE----KWRPFMLFL-----IIVPF-WTNSLIRTYGLKIVLGTQG 129

Query: 133 -ITNLLVAVGLMAEPQSLSPSFGALLAGMVYQAFPYTVLVLYPALARLDPALVEASRTLG 191
            +   L+++GL+  P  +  +  A++ G+VY   P+ +L LY A+ +LD   +EA+R LG
Sbjct: 130 ILNQALMSLGLIDAPLRIMFTETAVMIGLVYILLPFMILPLYSAIEKLDGTYIEAARDLG 189

Query: 192 ASPLKAFFTVVVPAQRNTIVATLIMAFVFALGSYLLPQLLGRPQHWTLSVLITDQAIYQS 251
           A+  +    V++P     I+   ++  + ALG + +  LLG  ++  +  +I  Q +   
Sbjct: 190 ANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLLGGAKNLLIGNVIKSQVLNAR 249

Query: 252 NMPFAAAMAVFLVL 265
           + PF AA ++ L L
Sbjct: 250 DWPFGAATSIALTL 263