Pairwise Alignments

Query, 290 a.a., Trehalose transport system permease protein SugA from Azospirillum sp. SherDot2

Subject, 351 a.a., sugar ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  119 bits (298), Expect = 1e-31
 Identities = 84/279 (30%), Positives = 139/279 (49%), Gaps = 10/279 (3%)

Query: 10  ARLTMSPAVILLLGWMLIPLVMTLYFSFLRYNLLMPG--TEEFIGTLNYQYFLT-DPAFF 66
           AR  + P  IL L  ++ PL++  Y SF  +     G     F+G  NYQ  L  D  F 
Sbjct: 63  ARGLLLPGQILSLMVLITPLLVAFYMSFTDWAPTRGGLAAARFVGIENYQELLIYDTRFV 122

Query: 67  AALFNTLALVGGVLVLTIAGGIGLALLLDQPFWGRGIVRLLVIAPFFVMPTVSALVWKNM 126
            A+  TL L    L +  A G+GLA+L  + F G+ +   +V+ P  V+P V    +  +
Sbjct: 123 EAVVRTLLLSAVCLSIEFALGLGLAVLFLRRFRGKAVAFSVVLTPMMVLPVVVGYTFWML 182

Query: 127 LMN--PVNGLFAAIAKGLGLQPFDFLAEAPLSSIILIVT--WQWLPFATLILLTALQSLD 182
             +  PVN +   IA G G  P ++    P +  I+++T  W W P   LILL+ L +L 
Sbjct: 183 FQSNGPVNQIIELIA-GPGSAP-EWFRSTPFALAIVVITEVWHWTPLFFLILLSGLNALP 240

Query: 183 RERLEASEMDGAGAVDRFIHIILPHLARAMTVVTLIQTIFLLSVFAEILVTTNGGPGTAT 242
              + A+ + GA     F  ++LP L   + V  +I+++ ++ +F E+ + T GGPGT+T
Sbjct: 241 ENPVRAAVILGASPRQIFWRVVLPMLKPVIVVAFVIRSMEIVKLFDEVFMLTRGGPGTST 300

Query: 243 TNITYLVYAQSLLQFDVGGGSAGGIVAVVLANIVAVFLM 281
             ++  +Y  +   F +  G+A   + V+L  +  V L+
Sbjct: 301 ETVSLYIYKLAFNDFQLAYGAAAAFL-VLLGTLTLVHLL 338