Pairwise Alignments

Query, 436 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 424 a.a., carbohydrate ABC transporter substrate-binding protein, CUT1 family from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score = 77.0 bits (188), Expect = 1e-18
 Identities = 83/337 (24%), Positives = 133/337 (39%), Gaps = 39/337 (11%)

Query: 109 DVEDLLPSIRS---------GLTTDGTLYAAPFYGESSMVMYRKDLFEKAGLTMPEAPTW 159
           D+ +LLP+  +           T DG L + P++ +S ++ YRKDL +K    +P+  TW
Sbjct: 103 DLRELLPANATQGYFQAQVDNATVDGRLVSMPWFTDSGLLYYRKDLLDKYQQPVPQ--TW 160

Query: 160 AFVSDAARKLTDKK-----AEVYGICLRGKAGWGENMAFLSAMANSFGASWFDMNWKPQF 214
             ++  A+K+   +     A ++G   +G+A  G     L  +++       +       
Sbjct: 161 EDMTATAQKVQKAERDAGNATMWGYVFQGRAYEGLTCNALEWISSQPDGGLVNPRGDIVV 220

Query: 215 NTDPWKQTLTTYLGLMKDAGPPGASSNGFNENLALFQSGKCAMWIDATVAASFVSNPAQS 274
           N+   +  LT     + D  PPG  +    E   +FQSG      +     + V +   S
Sbjct: 221 NSQASRVALTLAKSWVGDISPPGVLNYTEEEGRGVFQSGNALFMRNWPYVWALVQS-KDS 279

Query: 275 KVADKVGYALAPDTGL-GKRSNWLWAWSLAVPASSKKGDAAQAFISWATSKDYLDLVAKE 333
            + DKVG A  P  G  G  ++ L  W LAV   S+    A   +++ TS        K+
Sbjct: 280 AIKDKVGVAPLPSGGANGTHASTLGGWGLAVSRYSRNPKLAAELVAYLTSAQQ----QKQ 335

Query: 334 EGWANVPPGTRSSLYANAEYRKAAPFADLTLKSIQAADPQHPTVQQVPYTGVQFVAIPEF 393
              A        SLYA+ E              + AA P +P +  +   GV   A    
Sbjct: 336 RALAGAYNPVIESLYADPE--------------LLAAMPYYPQLHSILSNGVMRPAAITA 381

Query: 394 QG---IGTAVGQAFSAALAGQTTADQALQTAQTLATR 427
            G   +  A      + LAG    DQAL   +   TR
Sbjct: 382 NGYPRVSNAFFDRVHSVLAGDIPVDQALVELERELTR 418