Pairwise Alignments

Query, 436 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 410 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 71.6 bits (174), Expect = 4e-17
 Identities = 104/428 (24%), Positives = 177/428 (41%), Gaps = 52/428 (12%)

Query: 7   LIGAAVAAFLGSSAQAETLSIATVNNGDMIRMQKLSEHFTKAHPDITLNWVTLE-ENVLR 65
           ++ +  A  + + A+  TL++ +++  D+     L + F   +  I + +  L+ ++V+ 
Sbjct: 13  VLASVSAGAMAAHAEDVTLTLWSLDR-DIQPAPNLIKEFNALNNGIKIEYRQLQFDDVVS 71

Query: 66  QRVTTDIAAKGGQYDILTIGTYEVPIWTKQKWLMPLTKLGANYDV---EDLLPSIRSGLT 122
           + +     + G   DI+ I      ++  +   + +T + A  DV   E+  P     +T
Sbjct: 72  ESMRA--YSTGNAPDIIAIDNPNHAMFASRGAFLDVTDMIAKSDVIKTENYFPGPLKSVT 129

Query: 123 TDGTLYAAPFYGESSMVMYRKDLFEKAGLTMPEAP-TWAFVSDAARKLTDKKAEVYGICL 181
            DG  +  P    +  + Y KDLF+ AGL   + P TW  + DAARKLT+    VYGI  
Sbjct: 130 WDGKYFGVPKATNTIALYYNKDLFKAAGLDAAKPPQTWDELVDAARKLTNPAKNVYGISF 189

Query: 182 RGKAGWGENMAFLSAMANSFGASWFDMNWKPQFNTDPWKQTLTTYLGLMKD-AGPPGASS 240
             KA       FL   A   GA++         NTD   + L T+  L+ +    P   +
Sbjct: 190 SAKANEEGTFQFL-PWAQMAGATY------KNINTDGAVKALETWKTLLDEKLASPDTLT 242

Query: 241 NGFNENLALFQSGKCAMWIDATVAASFVSNPAQSKVADKVGYALAP-DTGLGKRSNWLWA 299
               ++ A F +G  AM I        +   A+       G  L P  T    RS+ +  
Sbjct: 243 RSQWDSTATFNAGNAAMAISGPWEIDRMLKDAKF----DWGVTLLPVPTPDAPRSSAMGD 298

Query: 300 WSLAVPASSKKGDAAQAFISWATSKD------YLDLVAKEEGWANVPPGTRSSLYANAEY 353
           ++ A+ + +K    A   I +  SKD      +  L A+ +    VPP T ++L   A  
Sbjct: 299 YNWAIFSKTKHPAEAFKAIEFFASKDKDMFKNFGQLPARSD--IPVPP-TGNALKDEA-- 353

Query: 354 RKAAPFADLTLKSIQAADPQHPTVQQVPYTGVQFVAIPEFQGIGTAVGQAFSAALAGQTT 413
                     ++ ++ A P+ P+              PE+  I  A+  A   AL+GQ T
Sbjct: 354 ------LKTFVEQLKYAQPRGPS--------------PEWPKISKAIQDAIQGALSGQMT 393

Query: 414 ADQALQTA 421
              AL  A
Sbjct: 394 PKAALDQA 401