Pairwise Alignments

Query, 279 a.a., Nopaline-binding periplasmic protein from Azospirillum sp. SherDot2

Subject, 243 a.a., arginine ABC transporter substrate-binding protein from Serratia liquefaciens MT49

 Score =  154 bits (389), Expect = 2e-42
 Identities = 97/277 (35%), Positives = 150/277 (54%), Gaps = 41/277 (14%)

Query: 1   MKKILLALVLGALAAGSAVPAMAKDAKKLRIASEGAFAPWNGMDSSGKLVGFEIDLAWDL 60
           MKK+++A VL    AG +V A A  A+ +R A+E ++ P+  +D+  K+ GF++DLA  L
Sbjct: 1   MKKLIIAAVL----AGISVSASA--AETIRFATEASYPPFEFIDAGNKIQGFDVDLANAL 54

Query: 61  CKRIEADCELVAMDWDGMIPSLQQGKIDAIMAGMTITDERKKVIAFAGPYGTEQSTFATL 120
           CK ++A+C      +D +IPSL+  + DA+MAGM IT ER+K + F  PY    + F   
Sbjct: 55  CKEMQAECSFTNQAFDSLIPSLKFKRFDAVMAGMDITPEREKQVLFTKPYYDNSALFV-- 112

Query: 121 KSSKLAGAGVGAERVDLADEAAAKPAVAKLAELLKGKTVGVQTSTIQVDFLEKYLPDVTV 180
                      A++  +AD AA           LKGK VGVQ  T    +L    P++T 
Sbjct: 113 -----------AQKGKVADVAA-----------LKGKKVGVQNGTTHQKYLTDKHPEITT 150

Query: 181 RNYDKIDNAAIDLAAGRVDAIFGDRSPVEALMR-----AAGTDRMTLFGPAMTRGVLGEG 235
             YD   NA +DL  GRVDA+FGD + V   ++     AA  D++T       +   G G
Sbjct: 151 VPYDSYQNAILDLKNGRVDAVFGDTAVVNEWLKQNAALAAVGDKVT------DKDYFGTG 204

Query: 236 MGVGLRKADAELKGRLDKAIADANKDGTIATLSQKHF 272
           +G+ +R+ + +L+G+ + A+    +DGT  T+ +K F
Sbjct: 205 LGIAVRQKNTDLQGKFNAALDKIKQDGTYETIYKKWF 241