Pairwise Alignments

Query, 345 a.a., Ribose import permease protein RbsC from Azospirillum sp. SherDot2

Subject, 342 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Enterobacter asburiae PDN3

 Score =  214 bits (544), Expect = 3e-60
 Identities = 125/331 (37%), Positives = 190/331 (57%), Gaps = 19/331 (5%)

Query: 21  TVSTAKPARRFDP----HRFGPVVGLVLLLIVGTALNPDFATWDNMMNVLTRTAFIGIIS 76
           T +  K A R DP     RFG ++ ++LLLI   + N +F +  N+ N+LT  +  GI++
Sbjct: 8   TQAPVKRAGRIDPIAFFERFGVLIFMILLLIFFQSQNSNFFSERNIFNILTEVSIYGIMA 67

Query: 77  IGMCFVIISGGIDLSVGSMAALIAGGMILLMNALAGSVGSPVAVVAL----GMLFALLLG 132
           +GM FVI++ GIDLSVGS+ A+ A     ++     +   P A   +    G+   L +G
Sbjct: 68  VGMTFVILTAGIDLSVGSILAVCAMTAAYVIKGDNFTTVDPNAWGGMSWLIGLGICLAMG 127

Query: 133 GGFGLAHGYLITRGRIEPFIVTLGTLGIFRAVLTWLADGGAITLDNDLSDAYGPVYY--- 189
              G  HG  +TR R+ PFIVTLG + I+R +   + DG  I         + P Y    
Sbjct: 128 TAIGFLHGLGVTRLRLPPFIVTLGGMTIWRGLTLVINDGAPIA-------GFDPGYRWWG 180

Query: 190 -GSLLGIPVPVWVFLVVSVAGAVLLNRTAFGRYVQAIGSNEQVARFAAVDVDRVKLLTYG 248
            G LLGI +P+W+F +V+V G + L++T +GR+V AIG N + AR A V+V RV +  Y 
Sbjct: 181 RGELLGISIPIWIFAIVAVGGYLALHKTRWGRFVYAIGGNPEAARLAGVNVKRVLVSVYV 240

Query: 249 LLGVCVGIATVLYVPRLGSASPTTGLLWELEAIAAVIVGGTSFKGGEGRIAGTVIGAVLL 308
           L+G   G+A  +   RLGSA    G+ +EL  IA+V++GGTS  GG GRI GT+IG++++
Sbjct: 241 LIGCLAGLAGFILSARLGSAEAVAGISFELRVIASVVIGGTSLMGGYGRIGGTIIGSIIM 300

Query: 309 SVISNILNLTSIISVYLNAAVQGCVIIAVAF 339
            ++ N L L ++ + Y        +++AVAF
Sbjct: 301 GILINGLVLMNVSAYYQQIITGLIIVLAVAF 331