Pairwise Alignments

Query, 239 a.a., HTH-type transcriptional repressor NagR from Azospirillum sp. SherDot2

Subject, 247 a.a., transcriptional regulator, GntR family from Pseudomonas syringae pv. syringae B728a

 Score = 82.4 bits (202), Expect = 7e-21
 Identities = 67/235 (28%), Positives = 109/235 (46%), Gaps = 12/235 (5%)

Query: 6   DNATALYRQIADRLRDEIAARLFEPSGRLPTESEIGTRFGVSRVTVRLALDRLEADGLIE 65
           D    LY+++ D L  +IA   + P   +PTE+ +   + +S  TVR A+D L +D ++E
Sbjct: 11  DERLPLYQRLRDSLAQQIANNRWRPGEAIPTEAALSAEYCLSTGTVRKAIDLLVSDNILE 70

Query: 66  RRKGKGTFTAGKRVQHPLDRLRSFHESLRLQGLDAAMRPISARIVATPPDLREDF----G 121
           R++G+GTF    + Q  L R   F      + +  + R +S   V  P  + +      G
Sbjct: 71  RQQGRGTFIRRAQFQSSLFRFFRFQTEAGERRVPES-RILSVEPVDAPSSVAQALGMAAG 129

Query: 122 PHCLEVCRLHLVDGEPVALGRSLLP----PALEPVDWQAAGHKPIYGILQDIVGKPVGGA 177
              + + RL L+DG+PV      LP     AL  +D    G   +Y I +D  G+ V  A
Sbjct: 130 APVIRMVRLRLMDGQPVLAEEIWLPRARFQALLELDLDTQG-PLLYPIYEDACGQVVACA 188

Query: 178 DIEVKAAAADAEVAAALGLPAGAPVLVMDRRSVFVGGGCAD--RSVFHIRSERYS 230
              + A   +      L +P G+ V+V++R ++   G   +  RS  H    RYS
Sbjct: 189 QESLTAETVNDVYGRLLQIPVGSAVVVIERLALNYAGEPLEWRRSRGHASHFRYS 243