Pairwise Alignments

Query, 180 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 168 a.a., type VI secretion system contractile sheath small subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 72.8 bits (177), Expect = 3e-18
 Identities = 55/156 (35%), Positives = 73/156 (46%), Gaps = 7/156 (4%)

Query: 16  RVKLTYEVHTGGATEMKELPFLVGVLADLSGKPEKPLPKLKERKFVEVDRDNFNDVLASA 75
           R+ + Y   TG A    ELP    V+ D  G  E+    L+ER  V VD++NF  V+  +
Sbjct: 12  RINIKYIPATGDAQAEVELPLKTLVVGDFKGHAEQT--PLEERATVTVDKNNFEAVMRES 69

Query: 76  APRLAFQVDNKLQPD-GGKLNVLLNFDDMGDFEPVQVLNQVPALARLFEARQKLSDLLAK 134
             ++   V NKL  D   +L V LNF  + DF P  V +QVP L +L E R+ L  L   
Sbjct: 70  ELKITATVKNKLTDDENAELPVELNFKSLADFAPDAVASQVPELKKLIELREALVALKGP 129

Query: 135 LDG----NDELSGLLNDVISNTEQQDELKKLLGPTE 166
           L       + L  LLN   S  +   EL  L G  E
Sbjct: 130 LGNIPAFRERLQSLLNSEESREKLLAELNLLSGQEE 165