Pairwise Alignments

Query, 345 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 347 a.a., type VI secretion system baseplate subunit TssG from Pseudomonas fluorescens SBW25

 Score =  143 bits (360), Expect = 7e-39
 Identities = 102/330 (30%), Positives = 162/330 (49%), Gaps = 14/330 (4%)

Query: 1   MATPGRQSARPL--IEALEAEPWGFDLFQAIALLERAAPDREPLGSGIDPDREAVRIEHD 58
           M +  R S+ P+  ++A+   PW +D FQA+  +E  +P+   LG  +    + +R+   
Sbjct: 1   MESQARTSSDPVSTLDAMHQAPWEYDFFQALRRIECESPELPRLGHSLRLADDPLRLGQQ 60

Query: 59  ATLAFPASDVVSARQDEDGRGV-VRSPVLGLGGTGGPLPYVATEMMLERAARH-DTAGAA 116
           A   F  + + S     DG+   +     GLGG  GPLP   TE + ER   + D+    
Sbjct: 61  ADCTFAPATLASVDPGGDGKPARLEQFFFGLGGPNGPLPLHITEYVRERQRNNADSTSKH 120

Query: 117 FYDIFNHRLMSILYRTRQGSLPLLERD-PERSLLARALRSLVGIGTGHLEERLPGAPDRM 175
           F D+F+HRL+S+ YR    + P +  D P+    +  L +L G G   L  +    PD  
Sbjct: 121 FLDVFHHRLLSLFYRAWAEARPTVSHDRPDDDYWSARLAALSGRGMPSLLNQ-GLIPDAA 179

Query: 176 LLAFSGILSCRVRSAAGLETMIGAIFQVEARVKGFVGRWLPLGEEATTVVSSGRRGRNNR 235
            L +SG LS + R   GL+ ++G  F +   ++ +VG+WL L E +   VS+      NR
Sbjct: 180 KLHYSGHLSAQTRYPDGLKAILGEYFGLPVAIEEYVGQWLGLPERSRVGVSA------NR 233

Query: 236 LGQDMVVGRRVWDQQTCYAIELKMDSLERYRDFLPSGRHHATLCAIARFHSGDGMDFQIS 295
           LG D  +G  VWD+Q  + I L   +L+ Y   LP  +    L A    + G  +D+ ++
Sbjct: 234 LGVDFCLGSFVWDRQHKFRIRLGPLTLDDYMGMLPGHQPFNELVAWVAEYLGHELDWDLN 293

Query: 296 LVLSPPMVPHTRLSARDGSLLGWTSWLRFP 325
           LVL    VP  +L+ +    LG+ +WL  P
Sbjct: 294 LVLQQAEVPALQLNGQ--FRLGFNTWLGKP 321