Pairwise Alignments

Query, 560 a.a., Alpha-hemolysin translocation ATP-binding protein HlyB from Azospirillum sp. SherDot2

Subject, 720 a.a., type I secretion system permease/ATPase from Escherichia coli ECRC99

 Score =  194 bits (492), Expect = 1e-53
 Identities = 140/529 (26%), Positives = 247/529 (46%), Gaps = 8/529 (1%)

Query: 23  VFAASLAANLLGLASSFYTMLVLNRYVTHGVDSTLAALTVGVVLSIAFEHLFRHVRLGIA 82
           +  ASL AN+L LA+  ++M V +R V      TL  L  GV+++I FE   R VR  ++
Sbjct: 162 IMLASLVANVLALAAMIFSMQVYDRVVPAQSYPTLWVLFAGVMMAILFEFCMRMVRTHLS 221

Query: 83  GRIGRAEHDRLATGAFGILLTARSGAGSAEGDAARREAMRAPEQIDAALGSANLATLFDL 142
             IG+    R++   FG  L  ++   S +   +    +R  E +   + S  +  + DL
Sbjct: 222 DVIGKRADLRISDRVFGHALRLKNNVRS-KSTGSFISQIRELESVRELITSTTIGAVADL 280

Query: 143 PFALGFILVVALVSWPLAAICVLFTLLSIAAGLLAQADMRAVGRDLAQAGADAQGLVTSA 202
           PF L F+ ++ ++   L  + +L   L +  GLL Q  +  +  +  +  A     +  A
Sbjct: 281 PFFLLFVFILWMIGGWLVLVVLLALPLLVIPGLLVQRPLARLANEGMRESAVRNATLVEA 340

Query: 203 IVGRDAAALFGGAKPLLGDWQRAAKTLRSLRERMSMRQGRAQSMAQSLQALQGVAVIATG 262
           +   +   L    +     W        S+  +     G   +  Q +Q++  V V+  G
Sbjct: 341 VQSIEDIKLLRAEQRFQNQWNHTNDVASSISMKQRFLTGLLLTWTQEVQSIVYVVVLLVG 400

Query: 263 AVLVVRGELDVGSLIGVNLLVGRALAPFTRLAQIGESLAMARQAQSRLEQFARTAVEPPT 322
             +V+ G++  G+L+G  +L  R +AP ++++ +      A+ A++ L++  +  V+ P 
Sbjct: 401 CFMVMNGDMTTGALVGTTILASRTIAPLSQISGVLSRWQQAKVARNGLDELMKRPVDQPE 460

Query: 323 GTSLPR----YGGTLELRDLTYTPAGAVTPLLRRLSLSVPAGNILVLKGRNGSGKSTLIR 378
              L      +G       + Y         +    L++ AG  + + GRNG+GKSTL++
Sbjct: 461 HGKLVHKAVLHGNYQFSNAVFYYDEEEKIADVAIGKLNIQAGEKIAILGRNGAGKSTLLQ 520

Query: 379 LIAGLADPQEGAVLADGVDIRKFAPLWWRQQTGYLPQEPVFLNRTIRENLLLANPRLSET 438
           ++AG+   Q+G VL D + I +  P   R+  G L Q       ++RENL +  P  S+ 
Sbjct: 521 MLAGMRIAQQGQVLLDNISIGQLDPADLRRDMGLLSQTGRLFFGSLRENLTMGMPEASDE 580

Query: 439 DLQAVLHRAGAERAVADCAQGLDTPLRNFGQELPVGHRRRLALARALAVGGRLILLDEPT 498
           D++  L  +GA   V     GL+  ++  G  L  G R+ L LAR L     ++LLDEP+
Sbjct: 581 DIERALTLSGALPFVQKQKNGLNYMIQEGGFGLSGGQRQTLLLARLLISQPNIVLLDEPS 640

Query: 499 DGLDAEGTAVVYRTLIELARAGH-TVVIASHDPRILQGASLVLDLDQSQ 546
             LD    A +   L +    GH T++IA+H   +LQ    ++ +DQ +
Sbjct: 641 ASLDEMAEAYLIEQLKQW--IGHRTLIIATHRTAMLQLVDRIIVMDQGR 687