Pairwise Alignments

Query, 539 a.a., Periplasmic oligopeptide-binding protein from Azospirillum sp. SherDot2

Subject, 541 a.a., oligopeptide ABC transporter substrate-binding protein OppA from Erwinia amylovora T8

 Score =  288 bits (738), Expect = 3e-82
 Identities = 167/510 (32%), Positives = 273/510 (53%), Gaps = 10/510 (1%)

Query: 12  MVAAGLALFAGTAAQAATVLNRGNGGEPSTLDPHRTDGRIESNILRDLFEGLVVYGPDGR 71
           M A    + AG +   +  L   NG EPS+LDP +++G  ES+I  +L EGLV    +G+
Sbjct: 20  MQALAADIPAGVSLSDSQKLVINNGTEPSSLDPQKSEGVPESDITLNLLEGLVTTDNNGK 79

Query: 72  ILPGVAESWQVSEDGKLYSFQLRADARWSNGDAVTAEDFVYSLRRALTPKDGIQPSSNMR 131
           ++PGVA+SWQ ++ GK+++F LR+DARW+NG+ VTA DFVYS +R ++ +     +S  +
Sbjct: 80  LVPGVAQSWQ-NQQGKVWTFTLRSDARWNNGEPVTAADFVYSWQRLVSAETASPYASFAQ 138

Query: 132 V--IKGAAAVIDGTKPADTLGVAAPNPRTVTIALEAATPYFLDLIAADNSALPVHRGTVE 189
              +  A  ++    PA  LGV A +   V + L    PYFL ++A   +  P++R T+E
Sbjct: 139 AAHLLNADKILARELPASALGVRALDAHHVEVTLAEPVPYFLAMVA-HTAFKPLNRRTIE 197

Query: 190 SQRERWTDPGKMVSNGAYVLEEWRARQQIGLGRNANFHGRSGVSIDKVNFFPIDDSAEEV 249
           +  E+WT P   V NGAY L +W   ++I L RN  +      +I++V F PI     +V
Sbjct: 198 TWGEKWTQPAHYVGNGAYTLSDWVINEKIVLKRNPQYWNNRKTAIEQVTFLPISSETSDV 257

Query: 250 DRFKAGTLHLTYE-VPQDRVKWISLTEPKVFWNRPFLATYYYAFNLTVEPFKSNRDLRRA 308
           +R+++G + ++   +P DR + +           P+L T+YY  N    PF   R +R A
Sbjct: 258 NRYRSGEIDISNSALPPDRFQQLKQQLGAQVHVSPYLCTFYYELNNRRPPFNDAR-VRTA 316

Query: 309 LSLAVNRENIVDKVTRAGETPAYGLVPPIVPNYRRQTADFIAEPMDNRLREARRLFSTAG 368
           + + ++R  I +K+   G+ PAY L PP           +       R ++A+ L + AG
Sbjct: 317 VKMTLDRSIIAEKIMGQGQIPAYSLTPPYTDGAALTPPAWFTLSQPQRNQQAKALLAEAG 376

Query: 369 FSPMQPLAVEILYNQSENNRVIADAVISMWQDAFGKGIQVKPVSVERTDYLKRRARRDFQ 428
           ++   PL   +LYN S+ N+  A A  SMW      G QV   + E    L  R + ++ 
Sbjct: 377 YNATHPLRFSLLYNTSDVNKQQAIAAASMWNK--NLGAQVTLQNQEWKTLLDSRHQGNYD 434

Query: 429 IVRAAWIGDYADPTVFLNLMLSTALPPRNDPGYRSRKYDDLLAKAAASEDAAQRSSLLGQ 488
           + RA W  DY +P+ FLN+M+  A    N   YRS  +D+L+ ++    D  QR+ +  Q
Sbjct: 435 VARATWCSDYNEPSTFLNMMIGNA--STNTTFYRSAAFDELMKRSLTVADDVQRAQIYQQ 492

Query: 489 AEKAMIDDDPVIPIYHFSTKSLVSQQIKGW 518
           AE+ + +D  ++P+Y+  +  L+   + G+
Sbjct: 493 AEQRLDEDSALVPVYYRVSARLIKPWVGGY 522