Pairwise Alignments

Query, 314 a.a., Ribose import binding protein RbsB from Azospirillum sp. SherDot2

Subject, 296 a.a., D-ribose transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  129 bits (324), Expect = 9e-35
 Identities = 98/300 (32%), Positives = 158/300 (52%), Gaps = 16/300 (5%)

Query: 7   ACLASAVALAA---GSALAADKEIAVVVKTVNSTFWQNVQKGASTAQKEAD--GYTMTFQ 61
           A L SAVAL+A    +A+A D  IA+VV T+N+ F+ +++ GA   QKEAD  GY +   
Sbjct: 7   ATLVSAVALSATVSANAMAKDT-IALVVSTLNNPFFVSLKDGA---QKEADKLGYNLVVL 62

Query: 62  GPAAESAIADQVNMVENAVNRKVAGIVLAPSDPDALVPVLKKAWEAKIPVVLIDSPVSDA 121
              +++  A ++  V++   R    +++ P+D DA+   +K A +A IPV+ +D     A
Sbjct: 63  D--SQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQANIPVITLDR---QA 117

Query: 122 GKQYYQAMLSTDNVKAGELCAKALIDKVGTSGKIAVMSYVAGAGSEIGRVGGFTKYIKDH 181
            K    + +++DNV  G++    +  K G   K+  +  +AG  +   R  GF + +  H
Sbjct: 118 TKGEVVSHIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQAVAAH 177

Query: 182 SKLEIVGPFYSQSQMATALNQTTDVLAANPDLKGIFGANEPTAIGMGRALAQSGKAGHIA 241
            K  ++    +       LN   ++L A+PD++ +F  N+  A+G  RAL  +GK+  + 
Sbjct: 178 -KFNVLASQPADFDRIKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKSD-VM 235

Query: 242 AVGFDGNQDLQGFVKDGTLEAIAVQGSYQMGYLGVQTAVKLTKREKVEKALDTGVVLVTK 301
            VGFDG  D +  V DG L A   Q   Q+G  GV+TA K+ K EKV+      + LV K
Sbjct: 236 VVGFDGTPDGEKAVNDGKLAATIAQLPDQIGAKGVETADKVLKGEKVQAKYPVDLKLVVK 295