Pairwise Alignments

Query, 283 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 314 a.a., choline ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25-INTG

 Score = 87.4 bits (215), Expect = 4e-22
 Identities = 80/286 (27%), Positives = 125/286 (43%), Gaps = 20/286 (6%)

Query: 8   LCAVAMVGMSIMPAQAAD-KAIKMGTLGWEDLTPITGITKKVLEDAGFSVKVTEFSEWGI 66
           L A A++   +M A AA  + ++MG + W D+   + +T+ +L+  G+  K T  S+  I
Sbjct: 12  LSASAILSTHVMAADAASCQNVRMGVVNWTDVIATSAMTQVLLDGLGYKTKQTSASQQ-I 70

Query: 67  AYAALTKGDIEVLAS-----QTDYVAQDYWDKNKNRLEKISPVSHGLYQGIAVPKYVAVD 121
            +A +    +++         T  +      K    L+K  P        +AVP Y+A  
Sbjct: 71  IFAGIRDQRLDLFLGYWNPLMTQTITPFVDAKQVKVLDK--PSLEDARATLAVPTYLADK 128

Query: 122 SLDQLNANADKF----GNKIIGIEPGSGLMRD--ASNAVKAYGL-KLQLVEGSTSAMTAA 174
            L    A+  KF    G KI GIEPGSG      A  A   +GL K QLVE S + M AA
Sbjct: 129 GLKTF-ADIAKFEKELGGKIYGIEPGSGANTQIKAMIAKNQFGLGKFQLVESSEAGMLAA 187

Query: 175 LKSAFDRKEPIAVTIWEPSWMAQKFDMKYLADPKAVFPPPQG---YYWIGRKGFSEQNPQ 231
           +  A  RKE +    W P  M     M YL        P +G    + +    ++EQ P 
Sbjct: 188 VDRAVRRKEAVVFFGWAPHPMNVNVAMTYLTGSDDALGPNEGMATVWTVTAPTYAEQCPN 247

Query: 232 AREVMASVYVPLADITAINGAVKDGKTMDQAVKEWTDSHGDLIKRW 277
             +++ ++    AD + +   + D K   ++ K+W   H     RW
Sbjct: 248 VHKLLTNLTFTAADESRMMQPLLDHKDALESAKQWLKDHPQDQARW 293