Pairwise Alignments

Query, 289 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 292 a.a., HTH-type transcriptional activator RhaS from Azospirillum sp. SherDot2

 Score =  239 bits (610), Expect = 5e-68
 Identities = 126/276 (45%), Positives = 167/276 (60%), Gaps = 2/276 (0%)

Query: 12  NVVRIERRMHSWNGVTVVDVHEH-TRGEVLHSLVNDEDTGVALALNEVGGVTEPRLKPDQ 70
           N+  I  R  SWNGV V     H   GE+LH L  +  T +++ L+EVGG+TEPRL    
Sbjct: 14  NIRSIVTRSQSWNGVRVDITKAHYDEGEILHPLGYENKTRLSVNLDEVGGITEPRLSRTV 73

Query: 71  ACPLDHRPNHMTLVPKGMPLWGYATRDLHYSRYALLLFDLDALEMRFEEGFDVGMFARPR 130
            CP+ H+P +M   P G  LWGYA+  L +   A ++FDL+ALE R + G        PR
Sbjct: 74  PCPVGHKPRYMAFAPAGTALWGYAST-LGFCYDATVMFDLEALEERLQHGVSRSNGEAPR 132

Query: 131 LRFTDDRLHALIRMLVDIPEEDASMTLLGDSLTSAVFALLSNENEQLTAGPKLSCHALYL 190
           LR+ + R+  L+ MLV IPE D+S  L GDSLT+A+FA+     E       L+   L  
Sbjct: 133 LRYAEPRIWTLVNMLVAIPEGDSSYQLYGDSLTAAIFAIAFESQETHRRSGALAPWQLNR 192

Query: 191 VESYIQDQLPRRIELRELAELAQMSQWHFSRGFKESTGLSPYQWQLTKRLEMVKELLLQN 250
           V  Y+  +LPR++EL+ELA L  +SQWHF+R FK STG+SPYQWQL  RL+  + LLL  
Sbjct: 193 VVEYMTRRLPRQVELQELASLVNLSQWHFARAFKASTGMSPYQWQLDARLKEARNLLLAT 252

Query: 251 DAPLNAIATATGFRDTAHLVQTFKRRIGEAPAVWRR 286
           D  +  IA ATGF D  HL++ F+ +IG  PA WRR
Sbjct: 253 DLTIEDIAIATGFSDHMHLIRQFRNKIGMPPAAWRR 288