Pairwise Alignments

Query, 226 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 329 a.a., RluA family pseudouridine synthase (RefSeq) from Shewanella loihica PV-4

 Score =  102 bits (255), Expect = 7e-27
 Identities = 59/174 (33%), Positives = 97/174 (55%), Gaps = 1/174 (0%)

Query: 4   AQIQDRILYRDGLMLILDKPAGLPVHAGPAGGPNLERHFDALRFGFPKPPSLAHRLDRDT 63
           +Q++ RIL+ D  +++L+KPAG+ VH G      +     +LR    K   L HRLD++T
Sbjct: 102 SQLEGRILFEDKAIIVLNKPAGIAVHGGSGVDFGVIEAMRSLR-PQQKFLELVHRLDKET 160

Query: 64  SGCLILGRHAKALRKIGILFQNGKVDKTYWAVVAGTPPQESGRIELPLAKVSNKTGGWRI 123
           SG L++ +  +AL+ +    +  K+ K Y A+V G        I  PL K++ K+G   +
Sbjct: 161 SGVLLIAKKRRALKHLHDQLRYKKMQKDYMALVRGEWQNHDKVINAPLLKLTLKSGERIV 220

Query: 124 VGSPDGQAAVTDYVVRGQADGLTWLELTPHTGRTHQIRVHCASIGCPLVGDPQY 177
             + +G+ + T + +  +  G T ++ +P TGRTHQIRVHC   G P+  D +Y
Sbjct: 221 RVNQEGKPSETRFKIMQRYQGATLVQASPVTGRTHQIRVHCQYAGHPIACDEKY 274