Pairwise Alignments

Query, 1062 a.a., multidrug efflux RND transporter permease subunit OqxB28 from Azospirillum sp. SherDot2

Subject, 1069 a.a., Efflux pump membrane transporter BepE from Xanthobacter sp. DMC5

 Score =  836 bits (2159), Expect = 0.0
 Identities = 440/1063 (41%), Positives = 675/1063 (63%), Gaps = 21/1063 (1%)

Query: 3    ISKFFIDRPIFAGVLSVALFLAGAIAVFRLPISEYPEVVPPSVVVRAQFPGANPKVIAET 62
            IS+FFI+RP+ + VL++   L G +++ RLP+S+YP +VPP+V V   +PGA+ K + +T
Sbjct: 2    ISRFFIERPVLSNVLALVFVLIGLVSLIRLPVSQYPNIVPPTVSVSTSYPGASAKTMIDT 61

Query: 63   VASPLEEQINGVEGMLYMQSQANSDGNLALTVTFKLGTDPDKAQQLVQNRVAQAMPRLPS 122
            VA P+E+Q+NGVEGM+YMQS + SDG   L V+F +GTDP+ AQ LVQNRV  A+  LP+
Sbjct: 62   VALPIEQQVNGVEGMIYMQSWSASDGTYTLVVSFAIGTDPNMAQVLVQNRVNIALASLPT 121

Query: 123  DVQRLGVATVKSSPTLTMVVHLLSPNDRYDMTYLRNYAVLNVKDRLTRISGVGEVQVWGA 182
             VQ  GV  ++   ++   V L+SP+ RYD  +L NYA++N+++ L R+ GV  V V+GA
Sbjct: 122  AVQAQGVTILQKGTSILEFVTLISPDGRYDGLFLNNYAIINIQNELERVDGVANVAVFGA 181

Query: 183  GDYAMRVWLDPGKVAQRGLTATDVVNSIREQNVQVAAGVIGASPSLPDVPMQLSINARGR 242
            G YAMRVW+DP ++   GLT TDV N+I++Q+  V  G +G  P+  +   Q ++N  GR
Sbjct: 182  GTYAMRVWMDPDRMQAFGLTPTDVSNAIQKQSQIVTPGQLGLPPAPSNASFQYTVNVSGR 241

Query: 243  LKTADEFGDIVLKTGGEGG--VTRLRDVARVELAAAQYGLRSLLDNKPAVALGITQTPDA 300
            L    ++ +I++K     G  + R+RD+ RVEL A  Y    + DNKPA  +GI Q P A
Sbjct: 242  LDDVKDYENIIVKVDNSDGGRIVRIRDIGRVELGAQSYSKDFMQDNKPAAGIGIFQLPAA 301

Query: 301  NALAISDEVRKVMAELKGDMPDGVDYSIVYDPTQFVRSSIEAVVHTLLEAVALVVLVVIV 360
            NAL ++  V   M +LK + P+G+DY+I +D T FV +SI+ V  TL EA  LV++V+++
Sbjct: 302  NALDVAKRVAAKMEDLKKNFPEGLDYAIPFDTTLFVTASIDEVWKTLFEAAILVLVVILL 361

Query: 361  FLQTWRASIIPLLAVPISIVGTFSLLLAFGFSINALSLFGMVLAIGIVVDDAIVVVENVE 420
            FLQ WRA+++P   VP++I+G F+ + A GF+IN  +LF ++LAIGIVVDDAIV+VE V 
Sbjct: 362  FLQDWRATLVPATTVPVTIIGAFAAMDAMGFTINLSTLFAIILAIGIVVDDAIVIVEGVA 421

Query: 421  RNIASGLSARDATIRAMQEVSGPIIAIALTLVAVFVPLAAMTGLTGEFYKQFAMTIAIST 480
            R+I  G++ + A  +AM E+ GP++ I L L++VF+P + + GL+G+ +KQFA+ IA + 
Sbjct: 422  RHIEEGMAGQPAAEKAMDELFGPVVGITLVLMSVFLPASFIPGLSGQMFKQFALVIAATA 481

Query: 481  VISAFNSLTLSPALAAVLLRGHDEPQDWLTRAMNRVFGGFFRLFNRVFHRASEGYGRGVG 540
             ISA N+ TL P   A+ LR    P+        R F   +R FN ++ +A   Y   + 
Sbjct: 482  FISAINAATLKPTQCALWLRQPVPPE-------KRNF--IYRGFNAIYGKAEHWYTGVIS 532

Query: 541  GVVRRKGVMLAVYALLIGATVLLGRSVPSGFVPMQDKEYLISFAQLPNGASLDRTEAVIR 600
             +V    +M+ +   L+         +P+ F+P++D+ Y ++  QLP+ ++L+RT+ V+ 
Sbjct: 533  RMVHHSKLMVLIAIALMSVAGYGLTRIPTAFLPIEDQGYFLAHVQLPDASNLNRTKKVMA 592

Query: 601  EMTDIALKRPGVQSAVAFPGLSV-NGFTNSSSAGIVFVTLKP----FAERKDPSLSAGAI 655
            ++++   K PGVQ+ +A  G+SV +  +  ++AG+ ++TL P    +A +    LS   +
Sbjct: 593  DVSERIRKVPGVQTVLAISGISVLDNSSTLANAGVTYITLTPWDVRYATKGQDLLS---M 649

Query: 656  AMDLQQRYAGLKEAFVAIFPPPPVMGLGQLGGFKMQLEDR-GNLGYEALSDAVNAFVKRA 714
              +L +  AG++EA V I  PP + G+G   GF MQ + R GN  Y+ L     + V + 
Sbjct: 650  YENLGKAVAGVEEAEVVILVPPAIQGIGNAAGFTMQPQIRNGNFDYQLLEQITASMVDKG 709

Query: 715  AQTPELGPTFSAYQINVPQLDVDLDRVKAKQLGVNVADVFDTMQIYLGSLYVNDFNAFGR 774
                 L    S+++   PQ+ V+++R+KA+ LG+ V  VF T+  YLGS YVN  N FG 
Sbjct: 710  RAQSALSHVSSSFRAGAPQIQVEVNRIKAETLGITVGQVFSTISAYLGSTYVNQINKFGN 769

Query: 775  VYQVRVQADAPFRDTADDIGVLKTRN-AAGTMVPLSSLVTVQPGYGPEMVVRYNGFTAAD 833
            V+QV +QADA FR T  D+  LK R+     M+PL ++V ++   GP ++  YN + ++ 
Sbjct: 770  VFQVYIQADAGFRVTPADLMQLKVRSPTQNAMIPLGTVVDIKMTLGPPLISLYNLYPSST 829

Query: 834  VNGGPAPGFSSGQAEAAAERIAAEVLPRGVKLEWTDLTYQKILVGNAGLWVFPISVLLVF 893
            + G  A GFSSGQA +  E+IAA  LP G   EWT ++YQ+  VGN   +VF +++LLV+
Sbjct: 830  IVGTNAAGFSSGQALSLMEQIAASTLPPGTGFEWTAMSYQEKAVGNQIYYVFGLAILLVY 889

Query: 894  LVLAAQYESLTLPLAILLIVPMSVLSALFGVWLTGGDNNIFTQIGFMVLVGLSAKNAILI 953
             VLA QYES   P++++L VP+++L  +  +   G  NN++TQIG ++L+ L++KNAILI
Sbjct: 890  FVLAGQYESWIQPMSVILAVPLALLGTVSALLGLGVANNLYTQIGLVLLIALASKNAILI 949

Query: 954  VEFARELEHEGRGVVQAAIEASRLRLRPILMTSIAFIMGVVPLVTSSGAGAEMRHAMGVA 1013
            VE+ARE   EG  ++ AA+EASRLR RPILMTS AFI+GV+PLV ++GAGA  R ++G+A
Sbjct: 950  VEYAREKRAEGMEIMDAAVEASRLRFRPILMTSFAFILGVLPLVFATGAGANSRKSIGIA 1009

Query: 1014 VFAGMIGVTLFGLVLTPVFYVLLRKLAGAERRVDAPAEGGVQP 1056
            V +GM+  T   ++  P FY +L++     +     + G   P
Sbjct: 1010 VVSGMLASTCLAVLFVPSFYTVLQRFEEGRKGKKKSSAGHAPP 1052