Pairwise Alignments

Query, 1062 a.a., multidrug efflux RND transporter permease subunit OqxB28 from Azospirillum sp. SherDot2

Subject, 1059 a.a., multidrug efflux RND transporter permease subunit OqxB9 from Xanthobacter sp. DMC5

 Score = 1045 bits (2701), Expect = 0.0
 Identities = 551/1064 (51%), Positives = 739/1064 (69%), Gaps = 11/1064 (1%)

Query: 1    MNISKFFIDRPIFAGVLSVALFLAGAIAVFRLPISEYPEVVPPSVVVRAQFPGANPKVIA 60
            M  S FFIDRPIFA V+SV + + GA++  RLP+++YP++ PP + V  Q+PGA+ +++A
Sbjct: 1    MRFSHFFIDRPIFASVVSVVVIILGAVSYLRLPVAQYPDIAPPVITVTGQYPGASAEIVA 60

Query: 61   ETVASPLEEQINGVEGMLYMQSQANSDGNLALTVTFKLGTDPDKAQQLVQNRVAQAMPRL 120
            ETV +P+E+QINGVE M+Y+ S + +DG  +++VTF +GT+ D AQ  VQNRVA A PRL
Sbjct: 61   ETVVAPIEQQINGVEKMIYLSSNSTADGRFSISVTFDIGTNLDIAQVQVQNRVAIAAPRL 120

Query: 121  PSDVQRLGVATVKSSPTLTMVVHLLSPNDRYDMTYLRNYAVLNVKDRLTRISGVGEVQVW 180
            P++VQ++GV T K+SP L +VV L SP+   D  ++ N+A + VKD L+RI GVG + V+
Sbjct: 121  PAEVQQVGVVTAKASPDLLLVVSLYSPDGSRDPLFISNFANIEVKDVLSRIDGVGSITVF 180

Query: 181  GAGDYAMRVWLDPGKVAQRGLTATDVVNSIREQNVQVAAGVIGASPSLPDVPMQLSINAR 240
            G+ +YAM+VWLDP +++   LT TDVV +++ QNVQVA+G++   P       Q+++   
Sbjct: 181  GSREYAMQVWLDPDRLSALNLTTTDVVAALKAQNVQVASGILNQPPVPNQRAFQIAVRTL 240

Query: 241  GRLKTADEFGDIVLKTGGEGGVTRLRDVARVELAAAQYGLRSLLDNKPAVALGITQTPDA 300
            GRL     F DIV+K   +  + RL+DV RVE+AA  Y   S LD   ++ LGI Q P +
Sbjct: 241  GRLSDPQAFADIVIKQTDQA-LVRLKDVGRVEIAAQDYASTSFLDKDISINLGIFQRPGS 299

Query: 301  NALAISDEVRKVMAELKGDMPDGVDYSIVYDPTQFVRSSIEAVVHTLLEAVALVVLVVIV 360
            NALA  + V   MA +    P G+ Y+I Y+PT+F++ S++AVVHT+ EA+ LVVLVVI+
Sbjct: 300  NALATGNAVVAEMARIGKGFPAGLKYAIYYNPTEFIQQSVDAVVHTIGEAIVLVVLVVIL 359

Query: 361  FLQTWRASIIPLLAVPISIVGTFSLLLAFGFSINALSLFGMVLAIGIVVDDAIVVVENVE 420
            FLQTWRA+IIP+LA+PIS++GTF ++  FGFS+N LSLFG+VLAIGIVVDDAIVVVENVE
Sbjct: 360  FLQTWRAAIIPILAIPISLIGTFFVMALFGFSLNNLSLFGLVLAIGIVVDDAIVVVENVE 419

Query: 421  RNIASGLSARDATIRAMQEVSGPIIAIALTLVAVFVPLAAMTGLTGEFYKQFAMTIAIST 480
            RNI +GLS RDA  + M EV G ++AI+L L +VFVP A +TG++GEFY+QFA+TIA ST
Sbjct: 420  RNIEAGLSPRDAAYKTMDEVGGALVAISLVLSSVFVPTAFITGISGEFYRQFALTIAGST 479

Query: 481  VISAFNSLTLSPALAAVLLRGH---DEPQDWLTRAMNRVFGGFFRLFNRVFHRASEGYGR 537
            +IS   SLTLSPA+ A+LL+ H    E   W  R +     GFF LFNR F +   GY  
Sbjct: 480  LISLLVSLTLSPAMCALLLKPHRSAHEKPAWYARPIV----GFFGLFNRSFEKVGNGYAW 535

Query: 538  GVGGVVRRKGVMLAVYALLIGATVLLGRSVPSGFVPMQDKEYLISFAQLPNGASLDRTEA 597
                +VR   ++L VYA ++G    L  + P GF+P QD+ YLI  AQLP GAS+ RTE 
Sbjct: 536  MTARLVRFVALVLVVYAGIVGFGGWLFATTPQGFIPQQDRGYLIVVAQLPPGASMQRTEE 595

Query: 598  VIREMTDIALKRPGVQSAVAFPGLSVNGFTNSSSAGIVFVTLKPFAERKD-PSLSAGAIA 656
            V++   ++ L  PGV   V   G S   FTN+ +AG +FV L PF  R   P  +A AI 
Sbjct: 596  VMKRAGNLVLGTPGVGHIVNIAGFSGATFTNAPNAGAMFVILDPFTSRAGHPEQTAAAIQ 655

Query: 657  MDLQQRYAGLKEAFVAIFPPPPVMGLGQLGGFKMQLEDRGNLGYEALSDAVNAFVKRAAQ 716
              L  + A ++EA + +  PPPV G+G  GGF+M LEDR   G  AL +A  A +  AAQ
Sbjct: 656  KVLFGKVASIEEAQMIVVQPPPVQGIGNAGGFRMMLEDRSGAGLLALRNATYAMMGAAAQ 715

Query: 717  TPELGPTFSAYQINVPQLDVDLDRVKAKQLGVNVADVFDTMQIYLGSLYVNDFNAFGRVY 776
            TP L   +S ++ + PQL +D+DR KA+ L VNVADVF  +Q Y+GS YVNDFN FGR +
Sbjct: 716  TPGLMQVYSLFETSTPQLFLDIDRQKAQLLQVNVADVFSALQTYIGSSYVNDFNLFGRTF 775

Query: 777  QVRVQADAPFRDTADDIGVLKTRNAAGTMVPLSSLVTVQPGYGPEMVVRYNGFTAADVNG 836
            +V+ QADAPFR    D+  ++ R+A G  VPL S  TV+   GP  V RYN +  A+++G
Sbjct: 776  RVQAQADAPFRLDPKDVLSIRVRSANGQTVPLGSFTTVRDISGPYRVPRYNLYPTAELDG 835

Query: 837  GPAPGFSSGQAEAAAERIAAEVLPRGVKLEWTDLTYQKILVGNAGLWVFPISVLLVFLVL 896
             PAPG+S GQA    + +AA+VLP+G   EWT L YQ+   GN  ++ F + V+ VFLVL
Sbjct: 836  SPAPGYSQGQAIQIMQELAAKVLPQGFSYEWTALAYQQQRAGNTAIFAFALGVVFVFLVL 895

Query: 897  AAQYESLTLPLAILLIVPMSVLSALFGVWLTGGDNNIFTQIGFMVLVGLSAKNAILIVEF 956
            AAQYESLTLPLA++LIVPM +++AL GV L G DNNI TQ+GF+VL+GL+AKNAILIVEF
Sbjct: 896  AAQYESLTLPLAVILIVPMCLVAALIGVILRGQDNNILTQVGFIVLIGLAAKNAILIVEF 955

Query: 957  ARELEHEGRGVVQAAIEASRLRLRPILMTSIAFIMGVVPLVTSSGAGAEMRHAMGVAVFA 1016
            A++L+ +G G  +AA+EA+RLRLRPI+MTS+AFI+GVVPLV ++GAGAE+R A+G AVF+
Sbjct: 956  AKQLQDQGHGRREAAVEAARLRLRPIIMTSLAFILGVVPLVWATGAGAELRQALGTAVFS 1015

Query: 1017 GMIGVTLFGLVLTPVFYVLLRKLAGAERRVD--APAEGGVQPAE 1058
            GMIGVTLFGLV TPVFYV  + +A   RR +   P      PAE
Sbjct: 1016 GMIGVTLFGLVFTPVFYVFAQWIASIGRRKEPAVPPPSHPAPAE 1059