Pairwise Alignments

Query, 1062 a.a., multidrug efflux RND transporter permease subunit OqxB28 from Azospirillum sp. SherDot2

Subject, 1089 a.a., RND efflux system, inner membrane transporter from Variovorax sp. SCN45

 Score = 1475 bits (3818), Expect = 0.0
 Identities = 737/1041 (70%), Positives = 883/1041 (84%)

Query: 1    MNISKFFIDRPIFAGVLSVALFLAGAIAVFRLPISEYPEVVPPSVVVRAQFPGANPKVIA 60
            MN+SKFFIDRPIFAGVLS+ + +AG IA+  LPISEYPEV PPSVVVRAQ+PGANPKVIA
Sbjct: 1    MNLSKFFIDRPIFAGVLSLLMLIAGLIALRGLPISEYPEVAPPSVVVRAQYPGANPKVIA 60

Query: 61   ETVASPLEEQINGVEGMLYMQSQANSDGNLALTVTFKLGTDPDKAQQLVQNRVAQAMPRL 120
            ETVA+PLEEQINGVEGMLYM SQA +DG L LTVTF+LGTDPDKAQQLVQNRV+QA PRL
Sbjct: 61   ETVATPLEEQINGVEGMLYMGSQATTDGVLTLTVTFRLGTDPDKAQQLVQNRVSQAEPRL 120

Query: 121  PSDVQRLGVATVKSSPTLTMVVHLLSPNDRYDMTYLRNYAVLNVKDRLTRISGVGEVQVW 180
            P +V+RLG+ TVKS+P LTMVVHL+SPN+RYD+ YLRNYAVLNVKD L RI GVG+VQ++
Sbjct: 121  PEEVRRLGITTVKSAPDLTMVVHLVSPNNRYDINYLRNYAVLNVKDPLARIEGVGQVQIF 180

Query: 181  GAGDYAMRVWLDPGKVAQRGLTATDVVNSIREQNVQVAAGVIGASPSLPDVPMQLSINAR 240
            G GDY+MRVWLDP KVAQRGL+A+DVV +IR QNVQ AAGV+GASP L  V MQLSINA+
Sbjct: 181  GGGDYSMRVWLDPQKVAQRGLSASDVVAAIRGQNVQAAAGVVGASPGLSGVDMQLSINAQ 240

Query: 241  GRLKTADEFGDIVLKTGGEGGVTRLRDVARVELAAAQYGLRSLLDNKPAVALGITQTPDA 300
            GRL++ +EFGDI++K+G +G VTRLRD+ R+E+ AA Y LRSLL+N PAV +G+ Q P +
Sbjct: 241  GRLQSEEEFGDIIVKSGTDGAVTRLRDIGRLEMGAADYSLRSLLNNDPAVGMGVFQAPGS 300

Query: 301  NALAISDEVRKVMAELKGDMPDGVDYSIVYDPTQFVRSSIEAVVHTLLEAVALVVLVVIV 360
            NAL IS  VRK M EL  +MP+G++Y I YDPTQFVR+SIE+V+HTLLEA+ LVVLVVI+
Sbjct: 301  NALDISANVRKTMEELNKNMPEGLEYRIAYDPTQFVRASIESVIHTLLEAIMLVVLVVIL 360

Query: 361  FLQTWRASIIPLLAVPISIVGTFSLLLAFGFSINALSLFGMVLAIGIVVDDAIVVVENVE 420
            FLQTWRASIIPLLAVP+S++GTF++L   GFSINALSLFG+VLAIGIVVDDAIVVVENVE
Sbjct: 361  FLQTWRASIIPLLAVPVSVIGTFAVLHVLGFSINALSLFGLVLAIGIVVDDAIVVVENVE 420

Query: 421  RNIASGLSARDATIRAMQEVSGPIIAIALTLVAVFVPLAAMTGLTGEFYKQFAMTIAIST 480
            RNI +GL+ R+AT RAM+EVSGPIIAIAL LVAVFVPLA ++GLTG+FY+QFA+TIAIST
Sbjct: 421  RNIEAGLTPREATYRAMREVSGPIIAIALVLVAVFVPLAFISGLTGQFYRQFAVTIAIST 480

Query: 481  VISAFNSLTLSPALAAVLLRGHDEPQDWLTRAMNRVFGGFFRLFNRVFHRASEGYGRGVG 540
            VISA NSLTLSPALAA+LLRGHD+P+D LTR M+R FG  FR FN++FHR SE Y  GV 
Sbjct: 481  VISAINSLTLSPALAALLLRGHDQPKDALTRGMDRAFGWLFRGFNKLFHRGSEAYSGGVK 540

Query: 541  GVVRRKGVMLAVYALLIGATVLLGRSVPSGFVPMQDKEYLISFAQLPNGASLDRTEAVIR 600
             V+ RK +MLA+Y  LI  T  L ++VP GFVP QDK+YLI FAQLP+GA+LDRT+ VI+
Sbjct: 541  NVISRKALMLAIYVALIAVTFGLFKAVPGGFVPAQDKQYLIGFAQLPDGATLDRTDEVIQ 600

Query: 601  EMTDIALKRPGVQSAVAFPGLSVNGFTNSSSAGIVFVTLKPFAERKDPSLSAGAIAMDLQ 660
             M +I  K P V+ A+AFPGLS+NGFTNSS++GIVF TLKPF +RK P  S GA+A  L 
Sbjct: 601  RMGEIMKKNPNVEDAIAFPGLSINGFTNSSNSGIVFATLKPFDQRKRPDQSGGAVAGQLN 660

Query: 661  QRYAGLKEAFVAIFPPPPVMGLGQLGGFKMQLEDRGNLGYEALSDAVNAFVKRAAQTPEL 720
              +AG+++AF+ +FPPPPV GLG  GGFK+QLEDR ++GY+ +  AV AF+ +A Q PEL
Sbjct: 661  GAFAGIQDAFIVMFPPPPVAGLGTTGGFKLQLEDRASVGYDQMDAAVKAFMAKAQQAPEL 720

Query: 721  GPTFSAYQINVPQLDVDLDRVKAKQLGVNVADVFDTMQIYLGSLYVNDFNAFGRVYQVRV 780
               F+++Q+NVPQL  D+DR KA+QLGV V D+FDTMQIYLGSLY NDFN FGR Y VRV
Sbjct: 721  AGMFTSWQVNVPQLYADIDRTKARQLGVPVTDIFDTMQIYLGSLYANDFNKFGRTYSVRV 780

Query: 781  QADAPFRDTADDIGVLKTRNAAGTMVPLSSLVTVQPGYGPEMVVRYNGFTAADVNGGPAP 840
            QADAP+R  A+D+G+LK R+ +G MVPLS+L+ V   +GPE  +RYNG+ AAD+NGGPAP
Sbjct: 781  QADAPYRARAEDVGLLKVRSTSGEMVPLSALMKVNSTFGPERAMRYNGYLAADINGGPAP 840

Query: 841  GFSSGQAEAAAERIAAEVLPRGVKLEWTDLTYQKILVGNAGLWVFPISVLLVFLVLAAQY 900
            G+SSGQA+ A  +IAAE LP+GV  EWT+LTYQ+IL GN+   VFP+++LLVFLVLAAQY
Sbjct: 841  GYSSGQAQDAITKIAAETLPKGVSFEWTELTYQEILAGNSAFLVFPLAILLVFLVLAAQY 900

Query: 901  ESLTLPLAILLIVPMSVLSALFGVWLTGGDNNIFTQIGFMVLVGLSAKNAILIVEFAREL 960
            ESLTLP+AI+LIVPM +++A+ GVW++GGDNN+FTQIG +VLVGLSAKNAILIVEFAREL
Sbjct: 901  ESLTLPIAIILIVPMGIMAAMAGVWISGGDNNVFTQIGLIVLVGLSAKNAILIVEFAREL 960

Query: 961  EHEGRGVVQAAIEASRLRLRPILMTSIAFIMGVVPLVTSSGAGAEMRHAMGVAVFAGMIG 1020
            E  GR  VQAAIEASRLRLRPILMTS+AF+MGV+PLV S+GAG+EMR AMGVAVFAGMIG
Sbjct: 961  EFAGRTPVQAAIEASRLRLRPILMTSLAFVMGVLPLVLSTGAGSEMRKAMGVAVFAGMIG 1020

Query: 1021 VTLFGLVLTPVFYVLLRKLAG 1041
            VT FGL LTPVFYVLLR+LAG
Sbjct: 1021 VTAFGLFLTPVFYVLLRRLAG 1041