Pairwise Alignments
Query, 1062 a.a., multidrug efflux RND transporter permease subunit OqxB28 from Azospirillum sp. SherDot2
Subject, 1059 a.a., multidrug efflux RND transporter permease subunit from Lysobacter sp. OAE881
Score = 1192 bits (3085), Expect = 0.0
Identities = 629/1041 (60%), Positives = 780/1041 (74%), Gaps = 5/1041 (0%)
Query: 1 MNISKFFIDRPIFAGVLSVALFLAGAIAVFRLPISEYPEVVPPSVVVRAQFPGANPKVIA 60
M+ SKFFIDRPIFA VLS+ +F AG I++ LPI EYPEVVPPSVVVR +PGANPKVIA
Sbjct: 1 MDFSKFFIDRPIFAAVLSIVIFAAGLISIPLLPIGEYPEVVPPSVVVRTVYPGANPKVIA 60
Query: 61 ETVASPLEEQINGVEGMLYMQSQANSDGNLALTVTFKLGTDPDKAQQLVQNRVAQAMPRL 120
ETVA+PLEE I GVEG++Y++S A+SDG L +TVTF+ + D+A VQNRV+QA+ RL
Sbjct: 61 ETVATPLEESIRGVEGLMYVKSVASSDGVLQITVTFRPEVNADEATVRVQNRVSQALARL 120
Query: 121 PSDVQRLGVATVKSSPTLTMVVHLLSPNDRYDMTYLRNYAVLNVKDRLTRISGVGEVQVW 180
P DV+R GV T K SP MVVHL SPN +YD YLRNY L++KD+L I GVGE Q +
Sbjct: 121 PEDVRRQGVTTQKQSPVFLMVVHLTSPNGKYDTLYLRNYLRLHIKDQLASIPGVGEAQPF 180
Query: 181 GAGDYAMRVWLDPGKVAQRGLTATDVVNSIREQNVQVAAGVIGASPSLPDVPMQLSINAR 240
G GDYAMR+WLDP KVA RG+TA+DV+ ++REQN+QV+AG +GA P INAR
Sbjct: 181 GGGDYAMRLWLDPDKVASRGMTASDVLRAVREQNIQVSAGQLGAEPMPNGSQFLTPINAR 240
Query: 241 GRLKTADEFGDIVLKTGGEGGVTRLRDVARVELAAAQYGLRSLLDNKPAVALGITQTPDA 300
GRL+T +EFG+IVLK G G V RL DVAR+ELAA Y +R+ LD + A A+GI Q P A
Sbjct: 241 GRLETPEEFGNIVLKGGDGGEVVRLSDVARIELAAGDYTMRARLDGQNAAAIGIFQAPGA 300
Query: 301 NALAISDEVRKVMAELKGDMPDGVDYSIVYDPTQFVRSSIEAVVHTLLEAVALVVLVVIV 360
NAL I DEV + M E P GV+Y +YD T FVR SI++VV TLLEA LVVLVVI+
Sbjct: 301 NALQIRDEVIRRMDEAAKRFPPGVEYKSIYDTTIFVRDSIKSVVTTLLEATLLVVLVVIL 360
Query: 361 FLQTWRASIIPLLAVPISIVGTFSLLLAFGFSINALSLFGMVLAIGIVVDDAIVVVENVE 420
FLQTWRASIIPL+AVP+S+VGTF+ L GFSIN L+LFG+VLAIGIVVDDAIVVVENVE
Sbjct: 361 FLQTWRASIIPLIAVPVSVVGTFAALYLLGFSINTLTLFGLVLAIGIVVDDAIVVVENVE 420
Query: 421 RNIASGLSARDATIRAMQEVSGPIIAIALTLVAVFVPLAAMTGLTGEFYKQFAMTIAIST 480
R+I G + +A AM+EVSGPIIAIAL L AVFVP+A ++G+TG+FYKQFA+TIAIST
Sbjct: 421 RHIEDGHTPLEAAHMAMREVSGPIIAIALVLCAVFVPMAFLSGVTGQFYKQFAVTIAIST 480
Query: 481 VISAFNSLTLSPALAAVLLRGHDEPQDWLTRAMNRVFGGFFRLFNRVFHRASEGYGRGVG 540
VISA NSLTLSPALAA LL+ H P+D L+R + R FG FR FNR F A+E Y GV
Sbjct: 481 VISAINSLTLSPALAARLLKPHGAPKDLLSRGIERGFGWIFRPFNRFFGTAAERYQNGVA 540
Query: 541 GVVRRKGVMLAVYALLIGATVLLGRSVPSGFVPMQDKEYLISFAQLPNGASLDRTEAVIR 600
V+ R+G + VYA L+ AT L+ + VP GFVP+QDK YLI+ ++P G+S++RT+A ++
Sbjct: 541 KVLGRRGAVFVVYAGLLLATGLMFQLVPRGFVPVQDKSYLIAGIKMPEGSSIERTDAALK 600
Query: 601 EMTDIALKRPGVQSAVAFPGLSVNGFTNSSSAGIVFVTLKPFAERKDPSLSAGAIAMDLQ 660
++ +IA+ GVQ+ VAFPGL+ F+N+ + G+ F+ LKPF +R + SA I +L
Sbjct: 601 KIGEIAMSIDGVQNDVAFPGLNPLQFSNTPNYGVTFINLKPFGQR---TRSAEEINAELS 657
Query: 661 QRYAGLKEAFVAIFPPPPVMGLGQLGGFKMQLEDRGNLGYEALSDAVNAFVKRAAQTPEL 720
Q+ + ++E F PPP+ GLG G+ + +EDRGNLGY AL AV AF +QTP L
Sbjct: 658 QKISAIQEGFAFSLQPPPIQGLGNGSGYSLYIEDRGNLGYGALQSAVQAFQGAGSQTPGL 717
Query: 721 GPTFSAYQINVPQLDVDLDRVKAKQLGVNVADVFDTMQIYLGSLYVNDFNAFGRVYQVRV 780
G S+YQ NVPQLD ++DRVKAK GV + ++FDT+Q YLGS YVNDFN FGR +QV
Sbjct: 718 GFPNSSYQANVPQLDAEVDRVKAKAQGVPLTELFDTLQTYLGSAYVNDFNMFGRTWQVVA 777
Query: 781 QADAPFRDTADDIGVLKTRNAAGTMVPLSSLVTVQPGYGPEMVVRYNGFTAADVNG-GPA 839
QAD PFRD+ +DI L+TRN G MVP+ S+V V +GP+ V+RYNG+ AAD+ G
Sbjct: 778 QADGPFRDSVEDIANLRTRNDRGEMVPIGSMVKVTETFGPDPVIRYNGYPAADILGEADV 837
Query: 840 PGFSSGQAEAAAERIAAEVLPRGVKLEWTDLTYQKILVGNAGLWVFPISVLLVFLVLAAQ 899
SS QA A E +A +VLP G+ +EWTDL+YQ+ G A L VFP++VLL FLVLAA
Sbjct: 838 NQLSSAQAMAKLEELAQKVLPNGMDIEWTDLSYQQATQGKAALIVFPLAVLLAFLVLAAL 897
Query: 900 YESLTLPLAILLIVPMSVLSALFGVWLTGGDNNIFTQIGFMVLVGLSAKNAILIVEFARE 959
YES TLPLA++LIVPM +LSAL GV+LT GDNN+F Q+G +VL+GL+ KNAILIVEFARE
Sbjct: 898 YESWTLPLAVILIVPMCMLSALLGVYLT-GDNNVFVQVGLVVLMGLACKNAILIVEFARE 956
Query: 960 LEHEGRGVVQAAIEASRLRLRPILMTSIAFIMGVVPLVTSSGAGAEMRHAMGVAVFAGMI 1019
LE +G+G+V+AA+EA RLRLRPI+MTSIAFI G VPLV S GAGAE+R A G+ VF+GMI
Sbjct: 957 LEMQGKGIVEAALEACRLRLRPIVMTSIAFIAGTVPLVLSHGAGAEVRQATGITVFSGMI 1016
Query: 1020 GVTLFGLVLTPVFYVLLRKLA 1040
GVTLFGL LTPVFYV LRKLA
Sbjct: 1017 GVTLFGLFLTPVFYVALRKLA 1037
Score = 63.9 bits (154), Expect = 6e-14
Identities = 71/291 (24%), Positives = 122/291 (41%), Gaps = 22/291 (7%)
Query: 762 GSLYVNDFNAFGRVYQVRVQADAPFRDTADDIGVLKTRNA-AGTMVPLSSLVTVQPGYGP 820
GS ++ NA GR+ +T ++ G + + G +V LS + ++ G
Sbjct: 230 GSQFLTPINARGRL------------ETPEEFGNIVLKGGDGGEVVRLSDVARIELAAGD 277
Query: 821 -EMVVRYNGFTAADVNGGPAPGFSSGQAEAAAERI---AAEVLPRGVKLEWTDLTYQKIL 876
M R +G AA + APG ++ Q R AA+ P GV E+ + I
Sbjct: 278 YTMRARLDGQNAAAIGIFQAPGANALQIRDEVIRRMDEAAKRFPPGV--EYKSIYDTTIF 335
Query: 877 VGNAGLWVFPI---SVLLVFLVLAAQYESLTLPLAILLIVPMSVLSALFGVWLTGGDNNI 933
V ++ V + LLV LV+ ++ + L+ VP+SV+ ++L G N
Sbjct: 336 VRDSIKSVVTTLLEATLLVVLVVILFLQTWRASIIPLIAVPVSVVGTFAALYLLGFSINT 395
Query: 934 FTQIGFMVLVGLSAKNAILIVEFARELEHEGRGVVQAAIEASRLRLRPILMTSIAFIMGV 993
T G ++ +G+ +AI++VE +G ++AA A R PI+ ++
Sbjct: 396 LTLFGLVLAIGIVVDDAIVVVENVERHIEDGHTPLEAAHMAMREVSGPIIAIALVLCAVF 455
Query: 994 VPLVTSSGAGAEMRHAMGVAVFAGMIGVTLFGLVLTPVFYVLLRKLAGAER 1044
VP+ SG + V + + + L L+P L K GA +
Sbjct: 456 VPMAFLSGVTGQFYKQFAVTIAISTVISAINSLTLSPALAARLLKPHGAPK 506
Score = 50.4 bits (119), Expect = 7e-10
Identities = 47/216 (21%), Positives = 89/216 (41%), Gaps = 4/216 (1%)
Query: 291 ALGITQTPDANALAISDEVRKVMAELKGDMPDGVDYSIV-YDPTQFVRSSIEAVVHTLLE 349
A I D N L+ + + K+ + +P+G+D Q + +V L
Sbjct: 828 AADILGEADVNQLSSAQAMAKLEELAQKVLPNGMDIEWTDLSYQQATQGKAALIVFPL-- 885
Query: 350 AVALVVLVVIVFLQTWRASIIPLLAVPISIVGTFSLLLAFGFSINALSLFGMVLAIGIVV 409
AV L LV+ ++W + +L VP+ ++ + G + N G+V+ +G+
Sbjct: 886 AVLLAFLVLAALYESWTLPLAVILIVPMCMLSALLGVYLTGDN-NVFVQVGLVVLMGLAC 944
Query: 410 DDAIVVVENVERNIASGLSARDATIRAMQEVSGPIIAIALTLVAVFVPLAAMTGLTGEFY 469
+AI++VE G +A + A + PI+ ++ +A VPL G E
Sbjct: 945 KNAILIVEFARELEMQGKGIVEAALEACRLRLRPIVMTSIAFIAGTVPLVLSHGAGAEVR 1004
Query: 470 KQFAMTIAISTVISAFNSLTLSPALAAVLLRGHDEP 505
+ +T+ + L L+P L + ++P
Sbjct: 1005 QATGITVFSGMIGVTLFGLFLTPVFYVALRKLANKP 1040