Pairwise Alignments

Query, 564 a.a., Methyl-accepting chemotaxis protein from Azospirillum sp. SherDot2

Subject, 567 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  305 bits (782), Expect = 2e-87
 Identities = 222/569 (39%), Positives = 311/569 (54%), Gaps = 20/569 (3%)

Query: 2   RLLENLTIRAKLTALVALSVLAPAVVIAISSSFAHQRMIDDRIDTIRSAVEMAVGMAKGL 61
           +L+  L I A L   V  SV+  A    +  + +  R+ D     + +A+ +   M   +
Sbjct: 11  KLVHKLLIPAVLLLAVMGSVVWTARSALVDLTASTSRVTDVVAGRLSAALTIQSAMGDAM 70

Query: 62  NAE---VEAGTLPR-EQALARFRNAVHAMSYHDGADYLFAYDLNGIAVANPSNHKAVGTD 117
           +AE   + AGT  R + A A +++ +           L A D    A   P++ +A+   
Sbjct: 71  DAESNALVAGTRERIDAAFATYKDNI--------GKALTAIDRLAAAYDAPADREAIS-- 120

Query: 118 RMGLQDKAGKY--FVREIVDTLRRQDNAIIHYVWPKLGSDVPLLKTNYVQRYQPLGLIVG 175
             G++   G+Y    ++ V+  R  D      V   +G  V   K N     +    +  
Sbjct: 121 --GIKSIVGEYERVSQKAVELARAYDTDSAIRVSIDVGRPVRQ-KLNAALSERVEHSLEE 177

Query: 176 SGVYTDDIDAAYHEFLTRT-GAATAALIAVLVLIAFLVNRDIVRSLHRLRDKMTALAAGD 234
           +    D   A     +TR  G A   L+    L   ++   +VR LHRL   MTA+A G+
Sbjct: 178 TKRAEDRALALSSSVMTRLYGVAGVGLLVAFGLFGSIIVAFVVRPLHRLVADMTAIADGN 237

Query: 235 MGVTFPEATRRNEIGGMTQALQVFKENAQAKASLEASQAEQAERAAAEKREAMTMLASHF 294
           + V    A R++EIG + +AL VFK N  A  +L+  +  Q  +A  +++  M  LA  F
Sbjct: 238 LAVDIQGAGRKDEIGLLARALLVFKSNGLAMRTLQEEREAQKLQAERDRQAGMRALADRF 297

Query: 295 EQTVGNLIHDVAGEADAIERRAQDMTRAADETGRLAGAVTAATEQTSANVQTVAAATEEL 354
           +  V +++  VA  A  +   A+ MT  A +T   A  V A T Q+SANV TVAAA+E+L
Sbjct: 298 DADVQDVVQAVATAARHLRGNAETMTAIASQTREQAATVAATTAQSSANVATVAAASEQL 357

Query: 355 TSSINEISRQVGSSAEIAREAVESAERANGKVEGLAGAVERIGAVVGLINSIASQTNLLA 414
            SSI EI RQV ++A IAR AV+  ER N  V  L  A +RIG VV LI +IASQTNLLA
Sbjct: 358 GSSIGEIGRQVNAAAAIARNAVQEGERTNALVARLVEAAQRIGDVVSLIQNIASQTNLLA 417

Query: 415 LNATIEAARAGEAGRGFAVVANEVKALANQTAQATEEIATQVAAIQGETTQAVREIRDVA 474
           LNATIEAARAGEAG+GFAVVA EVKALA QTAQATEEI +Q+A IQ  T   V  I+ + 
Sbjct: 418 LNATIEAARAGEAGKGFAVVAQEVKALATQTAQATEEIGSQIAEIQTVTDGTVTAIQTIG 477

Query: 475 QVIGRVNDVATSIASAVEQQGAATREISRNIQQAARGSHEVSSSIGGVNEAAGRNGTVAY 534
           + I  V+ +A +IASAVEQQ AAT+EI RNIQQAA+G+  V+ +I  V+ +AG+ G  A 
Sbjct: 478 RTINDVDSIAGAIASAVEQQTAATQEIGRNIQQAAQGTQLVTGNIAEVSSSAGQVGQAAT 537

Query: 535 EVLENVRELSMQTESLRGEVGRFLAQVRA 563
           EVL     LS  ++ LR  +  F+ +VRA
Sbjct: 538 EVLGAADSLSHDSDRLRERIQAFIGEVRA 566