Pairwise Alignments

Query, 220 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 647 a.a., SEL1-like repeat protein from Escherichia coli Nissle 1917

 Score = 60.8 bits (146), Expect = 6e-14
 Identities = 62/228 (27%), Positives = 90/228 (39%), Gaps = 31/228 (13%)

Query: 19  QSCLDRGEGGQ-----------------------AFAWFRSAARGGDARAINLLGRCHEH 55
           QSCL   E G                        AF WF  AA+     A+  LG  +  
Sbjct: 313 QSCLHAAEQGYSLAWYSLGKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALYALGIMYSD 372

Query: 56  GWGVPADPVQAAAHYRKAADLGDGWAMFNLADLHCRGIGVARDDEAAYRLYAASAAKGNA 115
           G G   +  +A   +  AA  G+  A + LA +    +   R+ E A + Y ++A +G+ 
Sbjct: 373 GRGTDKNICEARKWFLLAAQNGNTSAQYELARISRFAVEPLRNYEEALQWYLSAATQGHE 432

Query: 116 KALNMLGLFHESGRAVPADEAAARALFKAAAEGGDCWGRFNHARLLIGDGA----REEAL 171
            A   LG  +  G  V  DE  A   F  +AE G    +++ ARL  G  +    +E+AL
Sbjct: 433 VAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYLHAQYHTARLYSGSESIPQDQEKAL 492

Query: 172 RWFRLALDSGFPD----FYRSMAAALAPHPDPQIQALAAEALRLAESR 215
            WF  A  +G        Y      L  + DP+  A A + L  A  R
Sbjct: 493 YWFTKAAKNGADGAGDAMYELGKYYLTNNDDPENNAEATQWLTGAAQR 540



 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 43/143 (30%), Positives = 61/143 (42%), Gaps = 6/143 (4%)

Query: 12  DTLLALGQSCLDRGEGG-----QAFAWFRSAARGGDARAINLLGRCHEHGWGVPADPVQA 66
           D L ALG    D G G      +A  WF  AA+ G+  A   L R          +  +A
Sbjct: 361 DALYALGIMYSD-GRGTDKNICEARKWFLLAAQNGNTSAQYELARISRFAVEPLRNYEEA 419

Query: 67  AAHYRKAADLGDGWAMFNLADLHCRGIGVARDDEAAYRLYAASAAKGNAKALNMLGLFHE 126
              Y  AA  G   A + L  ++ +GIGV RD+  A+R +  SA +G   A       + 
Sbjct: 420 LQWYLSAATQGHEVAQYELGQMYIQGIGVERDEVQAHRWFLQSAEQGYLHAQYHTARLYS 479

Query: 127 SGRAVPADEAAARALFKAAAEGG 149
              ++P D+  A   F  AA+ G
Sbjct: 480 GSESIPQDQEKALYWFTKAAKNG 502



 Score = 46.6 bits (109), Expect = 1e-09
 Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 7/126 (5%)

Query: 60  PADPVQAAAHYRKAADLGDGWAMFNLADLHCRGIGVARDDEAAYRLYAASAAKGNAKALN 119
           P+   Q+  H   AA+ G   A ++L  ++  G  V++D + A+  +  +A      AL 
Sbjct: 308 PSSVYQSCLH---AAEQGYSLAWYSLGKMYYEGDEVSQDLKLAFNWFTRAAQHNVIDALY 364

Query: 120 MLGLFHESGRAVPADEAAARALFKAAAEGGDCWGRFNHARL--LIGDGAR--EEALRWFR 175
            LG+ +  GR    +   AR  F  AA+ G+   ++  AR+     +  R  EEAL+W+ 
Sbjct: 365 ALGIMYSDGRGTDKNICEARKWFLLAAQNGNTSAQYELARISRFAVEPLRNYEEALQWYL 424

Query: 176 LALDSG 181
            A   G
Sbjct: 425 SAATQG 430



 Score = 39.3 bits (90), Expect = 2e-07
 Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 5/100 (5%)

Query: 9   GPADTLLALGQSCL----DRGEGGQAFAWFRSAARGGDARAINLLGRCHEHGWGVPADPV 64
           G  D +  LG+  L    D     +A  W   AA+ G   AI LL   + +G    A   
Sbjct: 505 GAGDAMYELGKYYLTNNDDPENNAEATQWLTGAAQRGRIEAIFLLAEMYLYGTKYIAKDE 564

Query: 65  QAAAH-YRKAADLGDGWAMFNLADLHCRGIGVARDDEAAY 103
             A H Y KAA LG   A    A ++ +G G   D++ A+
Sbjct: 565 NHALHWYEKAARLGATEAQHQTAAMYAQGTGTKIDNKQAW 604