Pairwise Alignments
Query, 1072 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2
Subject, 838 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2
Score = 398 bits (1023), Expect = e-115
Identities = 300/829 (36%), Positives = 401/829 (48%), Gaps = 107/829 (12%)
Query: 309 APGFMYVWRGPDHVFEMANDAYFELIGRRDVIGKPGREALPEIVGQGFFELADRVYRTGE 368
+P M GP+ + N AY +G+R P +GQ + V+ T
Sbjct: 38 SPFAMCATWGPEQTL-LYNAAYVPFLGKRH----------PAALGQPIAAVWSEVWDTIG 86
Query: 369 PFVGEGMPAR---------IARRPGTPLEERFVTFVFQPIRDDEGQVTGLFVQGSDVTG- 418
P + + + R G E+ + TF + P+RD G+V G+ ++ T
Sbjct: 87 PLIARVLEGEAVSFTDMHLVMTRNGCE-EDTWWTFAYSPLRDG-GRVVGMLDIATETTAG 144
Query: 419 --MKRTEEALRES--------EQRLHIAQDAGG----------VGTFELRADG------- 451
R +A+ EQ + +AG VG L DG
Sbjct: 145 VIAARQRDAVEAELRARNVALEQEVAARTEAGNRFSTLIQHLPVGVCLLDGDGRALLSSP 204
Query: 452 ----LLAVSPQFCRLWGIDERPLVRLEELVGLIHPEDRPTLNTLQPGQVPTDGLGYVEYR 507
LL P R+ +E R + G P R G+V + G+ ++ +
Sbjct: 205 LYRELLPDEPVPSRMTNREEADRWRSFDADGERLPPSRYPAARALRGEVVSPGIEFLHRK 264
Query: 508 ILRPDTGAVRWIARRAQAFKRDEDADGGGVRVLGACYDITDRRCAEDALRALNATLEQRV 567
+ G W A + G + +L DI R+ A + R ++ +
Sbjct: 265 M----DGTECWFAVSSVPLTDGAGQVSGAIAMLE---DIDHRKRALETARTDAERVQLAL 317
Query: 568 AERTADRDRMWRLSTDIMLVARFDGTIGAVNPAWTTLLGWREEDLQGAVFLDFVHPDDLD 627
+ W L TD V ++PA LG + + A ++ VHPDD
Sbjct: 318 SAGAIIGTWFWDLPTDRFTVDEAFAATFGLDPA----LG--RDGISLAQVVETVHPDDRA 371
Query: 628 ATVAEVGRLRTGLTTLRFENRYRHKDGSYRWISWTAVPD------DRFIHAVGRDVTARK 681
+G + R R DG Y WI D R V DV R+
Sbjct: 372 GLAEAMGEAIARGGRYAHQYRVRRHDGRYYWIEANGRVDLDADGTPRGFPGVLIDVEERR 431
Query: 682 -------------------------EAAAALRRAEDQLRQAQKMEAVGQLTGGVAHDFNN 716
E A L +AE++LRQAQKMEAVGQLTGG+AHDFNN
Sbjct: 432 TIVAERDRAIAELRSLNDTLEQRVAERTAELMQAEEKLRQAQKMEAVGQLTGGMAHDFNN 491
Query: 717 LLQALSSCLTMIGRRSAEPR-LAPLLEAGMQAVDRGAKLVQQLMGFARRDSLRPEPIDVR 775
LLQA+S CL ++GRR+ + +LE+G QAVDRGA +++QLM F+RR SL PE D+R
Sbjct: 492 LLQAMSGCLQLVGRRAGHVAGVQKVLESGHQAVDRGASMIRQLMAFSRRQSLEPEAFDIR 551
Query: 776 DRVLGMAGLLERALRADIRLETRFAPGLHPIEVDPTQFELALINMAVNARDAMLGGGTLT 835
DR+LGM L+RALRADIRLE GL P DP QFELA++N+A NARDA+ G G L
Sbjct: 552 DRLLGMRSFLDRALRADIRLEFDLEGGLWPAMADPVQFELAILNLATNARDAIAGAGRLM 611
Query: 836 VEAENRTLGPGETTGLDGGGLEGEFLRLTVADTGTGMPPEVVARAFDPFFTTKEVGKGSG 895
+ G G GL G F+R+ V D+G GM P ++ R F+PFFTTK VG+G+G
Sbjct: 612 I-------GAGNVEQCGEHGLHGSFVRIWVRDSGHGMAPAMLERIFEPFFTTKPVGQGTG 664
Query: 896 LGLAQVYGLARQAGGTVWIESRPGEGTRIVLLLRAGTGIPRASAAPAQAAAGLVRGARVL 955
LGLAQVYG RQ+GG ++S G+GT++ LLL +P A A Q A GA VL
Sbjct: 665 LGLAQVYGFCRQSGGIATVDSVEGQGTKVTLLLPRAETMPVA-AVDVQRAMVDGGGASVL 723
Query: 956 MVEDDPVVASSVAAALEESGWTVLRAASADEALPLLAGDERIDLLFSDVVMPGRLSGIDL 1015
+VEDDPVVA + AALEE G+ V RA + +EAL LL ER DLLF+DVVMPG + G L
Sbjct: 724 LVEDDPVVALVIVAALEEIGYQVSRATTGEEALRLLRDGERPDLLFTDVVMPGEIDGAAL 783
Query: 1016 GREAALLRPGLPVVLTTGYSEDVARTEGIAVLSKPYRIDTLLQTLSEAL 1064
A +L P L VVLTTGYSED A +G VLSKPYRI+ L TL + +
Sbjct: 784 AAAARVLLPRLAVVLTTGYSEDRAALKGFPVLSKPYRIEDLALTLRQEI 832
Score = 104 bits (259), Expect = 3e-26
Identities = 61/166 (36%), Positives = 88/166 (53%), Gaps = 2/166 (1%)
Query: 4 LMMRSRQAMFIGWGPDVTVLYNDAYRDILGSRHPAALGRPMSEVWPDAWPQVRDFVRRAY 63
+M+ S AM WGP+ T+LYN AY LG RHPAALG+P++ VW + W + + R
Sbjct: 34 MMLASPFAMCATWGPEQTLLYNAAYVPFLGKRHPAALGQPIAAVWSEVWDTIGPLIARVL 93
Query: 64 EGESLLHEDLLVPLERRGLGEDYYFTFSYTPIAGETGCIGGFLCIVAETTLAV-RGRRRM 122
EGE++ D+ + + R G ED ++TF+Y+P+ + G + G L I ETT V R+R
Sbjct: 94 EGEAVSFTDMHLVMTRNGCEEDTWWTFAYSPLR-DGGRVVGMLDIATETTAGVIAARQRD 152
Query: 123 AFHAELEHRLRELTNPLCVVTVAAEALGRHLDASRVGYGVMDESER 168
A AEL R L + T A + VG ++D R
Sbjct: 153 AVEAELRARNVALEQEVAARTEAGNRFSTLIQHLPVGVCLLDGDGR 198